RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ATP6V1G2O95670 118 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 CTCFP49711 727 aaPredicted RBP16.25■□□□□ 0.19
VARS2-201ENST00000321897 SDCCAG8Q86SQ7 713 aaPredicted RBP16.25■□□□□ 0.19
VARS2-201ENST00000321897 FAM149B1Q96BN6 582 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 ERP27Q96DN0 273 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 TTC1Q99614 292 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 EXOC1LA0A1B0GW35 172 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 TM4SF1P30408 202 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 BAG6P46379 1132 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 KCNMA1Q12791 1236 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 EPHA7Q15375 998 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 LRRC36Q1X8D7 754 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 ACCSLQ4AC99 568 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 DNAJC24Q6P3W2 148 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 SEPT10Q9P0V9 454 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 SALL4Q9UJQ4 1053 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
VARS2-201ENST00000321897 STAM2O75886 525 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 IL1R1P14778 569 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 CNGA1P29973 690 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 PPP2R5EQ16537 467 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 DCAF15Q66K64 600 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 HSPH1Q92598 858 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 LRRC37BQ96QE4 947 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 MTMR9Q96QG7 549 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 FAM49AQ9H0Q0 323 aaPredicted RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 TMBIM4Q9HC24 238 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 GOLGA8RI6L899 631 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 SGPL1O95470 568 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 ERVK-9P63128 1117 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 SNRNP35Q16560 246 aaKnown RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 TMEM154Q6P9G4 183 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 KCNV1Q6PIU1 500 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 SPATA21Q7Z572 469 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 ZBTB8OSQ8IWT0 167 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 GSDMBQ8TAX9 411 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 C18orf8Q96DM3 657 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 NGRNQ9NPE2 291 aaKnown RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 CFAP73A6NFT4 308 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 BYSLQ13895 437 aaKnown RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 RHOT2Q8IXI1 618 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 EPS8L3Q8TE67 593 aaKnown RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 POLR3FQ9H1D9 316 aaPredicted RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 SAYSD1Q9NPB0 183 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 SERPINB6P35237 376 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 EDRF1Q3B7T1 1238 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 KRT39Q6A163 491 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 RFX6Q8HWS3 928 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 MPHOSPH6Q99547 160 aaKnown RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 SIK3Q9Y2K2 1263 aa16.24■□□□□ 0.19
VARS2-201ENST00000321897 USP15Q9Y4E8 981 aaPredicted RBP16.24■□□□□ 0.19
VARS2-201ENST00000321897 CFAP69A5D8W1 941 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 MAN1A1P33908 653 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 TMED1Q13445 227 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 PREPLQ4J6C6 727 aaPredicted RBP16.23■□□□□ 0.19
VARS2-201ENST00000321897 PPP6R3Q5H9R7 873 aaPredicted RBP16.23■□□□□ 0.19
VARS2-201ENST00000321897 DAB2IPQ5VWQ8 1189 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 GBP7Q8N8V2 638 aaPredicted RBP16.23■□□□□ 0.19
VARS2-201ENST00000321897 TPCN2Q8NHX9 752 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 FBXO41Q8TF61 875 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 ISCUQ9H1K1 167 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 DCCP43146 1447 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 PBX1P40424 430 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 QPCTQ16769 361 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.23■□□□□ 0.19
VARS2-201ENST00000321897 SPOPLQ6IQ16 392 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 LRRC55Q6ZSA7 311 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 ARHGAP24Q8N264 748 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 STK33Q9BYT3 514 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 TAS2R14Q9NYV8 317 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
VARS2-201ENST00000321897 TMEM120BA0PK00 339 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 ARL1P40616 181 aaPredicted RBP16.23■□□□□ 0.19
VARS2-201ENST00000321897 KRT81Q14533 505 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 CBWD6Q4V339 395 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 CBWD3Q5JTY5 395 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 CBWD5Q5RIA9 395 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 APTXQ7Z2E3 356 aaKnown RBP16.23■□□□□ 0.19
VARS2-201ENST00000321897 DNAJC19Q96DA6 116 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 VCX3BQ9H321 246 aa16.23■□□□□ 0.19
VARS2-201ENST00000321897 A0A1W2PQJ5 194 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 TLR3O15455 904 aaKnown RBP16.22■□□□□ 0.19
VARS2-201ENST00000321897 CCND2P30279 289 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 SLMAPQ14BN4 828 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 RHPN2Q8IUC4 686 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 FBXL13Q8NEE6 735 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 DDX27Q96GQ7 796 aaKnown RBP16.22■□□□□ 0.19
VARS2-201ENST00000321897 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 RNF8O76064 485 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 MAP7Q14244 749 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 CLUL1Q15846 466 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 KYNUQ16719 465 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 LRRC71Q8N4P6 559 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 FBXO25Q8TCJ0 367 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms