RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CNTNAP4Q9C0A0 1308 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 M0R2N6 131 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 OPLAHO14841 1288 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 C11orf63Q6NUN7 778 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 SENP1Q9P0U3 644 aa13.57□□□□□ -0.24
DNMT3A-202ENST00000321117 CLRN2A0PK11 232 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 DENND3A2RUS2 1198 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 GOLGA8SH3BPF8 625 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 GOLGA8MH3BSY2 632 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 HAUS5O94927 633 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 PDE6BP35913 854 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 BASP1P80723 227 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 KCNA1Q09470 495 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 ZBED8Q8IZ13 594 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 ATP6V0A1Q93050 837 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 TSNARE1Q96NA8 513 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 OSBPL1AQ9BXW6 950 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 P4HA2O15460 535 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 EIF2AK2P19525 551 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 SREBF1P36956 1147 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 SLC1A1P43005 524 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 COG2Q14746 738 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 ATG4AQ8WYN0 398 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 GINM1Q9NU53 330 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 RNF8O76064 485 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 FAM160B2Q86V87 743 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 C4orf33Q8N1A6 199 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 FAM118BQ9BPY3 351 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 SEPT9Q9UHD8 586 aaPredicted RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 SGPL1O95470 568 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 STAMBPO95630 424 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 KRT19P08727 400 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 PDIA2Q13087 525 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 DUPD1Q68J44 220 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 ZNF720Q7Z2F6 126 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 LNX1Q8TBB1 728 aaPredicted RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 OSBPL7Q9BZF2 842 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 ABCF3Q9NUQ8 709 aa13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 SMG5Q9UPR3 1016 aaKnown RBP13.56□□□□□ -0.24
DNMT3A-202ENST00000321117 O00370 1275 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 MAP3K7O43318 606 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 SORBS3O60504 671 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 NUDT17P0C025 328 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 MYBL1P10243 752 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 CD58P19256 250 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 POLGP54098 1239 aaPredicted RBP13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 POLE2P56282 527 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 ARL4CP56559 192 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 P3H1Q32P28 736 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 ZC3H18Q86VM9 953 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 KRT35Q92764 455 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 TTC17Q96AE7 1141 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 FAM213AQ9BRX8 229 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 TDRD3Q9H7E2 651 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 WHRNQ9P202 907 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 MYH15Q9Y2K3 1946 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 DCDC2CA8MYV0 355 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 H0YIN7 160 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 NKRFO15226 690 aaKnown RBP eCLIP13.55□□□□□ -0.241e-7■■■■□ 23.4
DNMT3A-202ENST00000321117 GZMAP12544 262 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 MAGEA4P43358 317 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 GNPTABQ3T906 1256 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 ENOSF1Q7L5Y1 443 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 RBM46Q8TBY0 533 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 TMEM117Q9H0C3 514 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 PRR12Q9ULL5 1215 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 PYGMP11217 842 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 ARSEP51690 589 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 AADACL2Q6P093 401 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 RFX6Q8HWS3 928 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 LRRC57Q8N9N7 239 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 LRRC15Q8TF66 581 aa13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
DNMT3A-202ENST00000321117 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 H7C0C1 242 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 DNM1LO00429 736 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 ATP5OP48047 213 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 MTMR1Q13613 665 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 SNRNP35Q16560 246 aaKnown RBP13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 Q4G0T1 1027 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 CASC4Q6P4E1 433 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 LONP2Q86WA8 852 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 RASGEF1CQ8N431 466 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 CPA5Q8WXQ8 436 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 MAML1Q92585 1016 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 USP21Q9UK80 565 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 RGPD5Q99666 1765 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 TTC4O95801 387 aa13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 IRX1P78414 480 aaPredicted RBP13.54□□□□□ -0.24
DNMT3A-202ENST00000321117 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms