RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 PDGFCQ9NRA1 345 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 SEPT11Q9NVA2 429 aaKnown RBP18.34■□□□□ 0.53
SSR4-201ENST00000320857 TRPC6Q9Y210 931 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 NCANO14594 1321 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 A0A0B4J269 797 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 ZRANB2O95218 330 aaKnown RBP eCLIP18.34■□□□□ 0.53
SSR4-201ENST00000320857 USP8P40818 1118 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 NLRP11P59045 1033 aaKnown RBP18.34■□□□□ 0.53
SSR4-201ENST00000320857 CDCA2Q69YH5 1023 aaPredicted RBP18.34■□□□□ 0.53
SSR4-201ENST00000320857 C15orf39Q6ZRI6 1047 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 SYCE1Q8N0S2 351 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 TPCN2Q8NHX9 752 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 HELQQ8TDG4 1101 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 KREMEN1Q96MU8 473 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 MRPL4Q9BYD3 311 aaKnown RBP18.34■□□□□ 0.53
SSR4-201ENST00000320857 SUGCTQ9HAC7 445 aa18.34■□□□□ 0.53
SSR4-201ENST00000320857 SIP14410 1827 aa18.33■□□□□ 0.53
SSR4-201ENST00000320857 TARSL2A2RTX5 802 aaKnown RBP18.33■□□□□ 0.52
SSR4-201ENST00000320857 ZBTB42B2RXF5 422 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 AOC2O75106 756 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 GH1P01241 217 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 SLC10A3P09131 477 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 TNNI1P19237 187 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 LAMTOR4Q0VGL1 99 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 DRP2Q13474 957 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 TFDP1Q14186 410 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 RPS6KA1Q15418 735 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 CFAP221Q4G0U5 840 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 GPR142Q7Z601 462 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 HNRNPLLQ8WVV9 542 aaKnown RBP18.33■□□□□ 0.52
SSR4-201ENST00000320857 RFFLQ8WZ73 363 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 KAT5Q92993 513 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 CCDC102AQ96A19 550 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 CALR3Q96L12 384 aaKnown RBP18.33■□□□□ 0.52
SSR4-201ENST00000320857 CAPNS2Q96L46 248 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 PNKPQ96T60 521 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 RBAKQ9NYW8 714 aaPredicted RBP18.33■□□□□ 0.52
SSR4-201ENST00000320857 ANKFY1Q9P2R3 1169 aa18.33■□□□□ 0.52
SSR4-201ENST00000320857 RBM47A0AV96 593 aaKnown RBP18.32■□□□□ 0.52
SSR4-201ENST00000320857 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 CES2O00748 559 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 MAPK4P31152 587 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 ACOT2P49753 483 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 GCNT1Q02742 428 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 ARHGAP1Q07960 439 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 PRPF4BQ13523 1007 aaKnown RBP18.32■□□□□ 0.52
SSR4-201ENST00000320857 GRB14Q14449 540 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 WDR44Q5JSH3 913 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
SSR4-201ENST00000320857 MMGT1Q8N4V1 131 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 LRRC57Q8N9N7 239 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 ZBTB45Q96K62 511 aaPredicted RBP18.32■□□□□ 0.52
SSR4-201ENST00000320857 ZIC5Q96T25 663 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 PSMB7Q99436 277 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 HAPLN2Q9GZV7 340 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 CCDC113Q9H0I3 377 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 C1orf112Q9NSG2 853 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 ERAP1Q9NZ08 941 aa18.32■□□□□ 0.52
SSR4-201ENST00000320857 SUCLA2Q9P2R7 463 aaPredicted RBP18.32■□□□□ 0.52
SSR4-201ENST00000320857 TMCO5BA8MYB1 307 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 FAM155AB1AL88 458 aaPredicted RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 CXCR5P32302 372 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 MKRN4PQ13434 485 aaPredicted RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 ZACNQ401N2 412 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 ZNF484Q5JVG2 852 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 WDR93Q6P2C0 686 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 MAMDC4Q6UXC1 1216 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 CRELD2Q6UXH1 353 aaPredicted RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 PLEKHH3Q7Z736 793 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 SLC20A1Q8WUM9 679 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 HHIPL1Q96JK4 782 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 ZCCHC17Q9NP64 241 aaKnown RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.31■□□□□ 0.521e-7■■■■■ 115.4
SSR4-201ENST00000320857 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 ADGRA2Q96PE1 1338 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 CLDN3O15551 220 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 ASAP2O43150 1006 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 CYP26A1O43174 497 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 TOM1L1O75674 476 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 C4BPAP04003 597 aaKnown RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 PRKCBP05771 671 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 SRGAP2CP0DJJ0 459 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 VEGFBP49765 207 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 C2orf54Q08AI8 447 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 MAPK6Q16659 721 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 SLFN11Q7Z7L1 901 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 DNAAF5Q86Y56 855 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 LRRC71Q8N4P6 559 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 RNF149Q8NC42 400 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 SPATA4Q8NEY3 305 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 ZNF516Q92618 1163 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 CGRRF1Q99675 332 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 PDE11AQ9HCR9 933 aa18.31■□□□□ 0.52
SSR4-201ENST00000320857 NOCTQ9UK39 431 aaKnown RBP18.31■□□□□ 0.52
SSR4-201ENST00000320857 SPDYE4A6NLX3 237 aa18.3■□□□□ 0.52
SSR4-201ENST00000320857 MSCO60682 206 aa18.3■□□□□ 0.52
SSR4-201ENST00000320857 RTN2O75298 545 aa18.3■□□□□ 0.52
SSR4-201ENST00000320857 SEC31AO94979 1220 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms