RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ACRP10323 421 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 SCP2P22307 547 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 FILIP1Q7Z7B0 1213 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 PLEKHO2Q8TD55 490 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 DPF3Q92784 378 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 CEP63Q96MT8 703 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 TRIM5Q9C035 493 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 PDE11AQ9HCR9 933 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 PRKAG2Q9UGJ0 569 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 STYXL1Q9Y6J8 313 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 GLRA4Q5JXX5 417 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 UBXN11Q5T124 520 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 FAM114A1Q8IWE2 563 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 ZC3H3Q8IXZ2 948 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 ZNF710Q8N1W2 664 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 ELMO3Q96BJ8 720 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 CGNQ9P2M7 1197 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 PARP2Q9UGN5 583 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 IPPQ9Y573 584 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 ZNF233A6NK53 670 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 EVI5O60447 810 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 RBL2Q08999 1139 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 SLC9A9Q8IVB4 645 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 C12orf56Q8IXR9 622 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 KCNN1Q92952 543 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 XPO4Q9C0E2 1151 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 FAM105AQ9NUU6 356 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 PCDHB2Q9Y5E7 798 aa16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDLIM5-202ENST00000318007 TNRC18O15417 2968 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 CLSTN1O94985 981 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 TIMP1P01033 207 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 MCF2P10911 925 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 KRT13P13646 458 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 UBASH3AP57075 661 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 BFSP1Q12934 665 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 SMG8Q8ND04 991 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 ANKRD20A12PQ8NF67 263 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 LINC01599Q8WXQ3 324 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 PTPRJQ12913 1337 aa16.74■□□□□ 0.27
PDLIM5-202ENST00000318007 SLC16A3O15427 465 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 MEFVO15553 781 aaPredicted RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 TEX33O43247 280 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 RECQL4O94761 1208 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 TNNI1P19237 187 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 EEF1GP26641 437 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 AXLP30530 894 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 GCLMP48507 274 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 VAMP7P51809 220 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 COPB1P53618 953 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 SNRPFP62306 86 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 CYP24A1Q07973 514 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 PCBP1Q15365 356 aaKnown RBP eCLIP16.73■□□□□ 0.275e-8■■■■■ 41.6
PDLIM5-202ENST00000318007 NFIL3Q16649 462 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 TMCO2Q7Z6W1 182 aaPredicted RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 RTN4RL1Q86UN2 441 aaPredicted RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 BADQ92934 168 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 RPF1Q9H9Y2 349 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 CPSF3Q9UKF6 684 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 LDHAP00338 332 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 AFF1P51825 1210 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 DCAF4L1Q3SXM0 396 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 PLEKHG4Q58EX7 1191 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 USP38Q8NB14 1042 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 ACAP3Q96P50 834 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 FNBP1Q96RU3 617 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 CRACR2AQ9BSW2 395 aa16.73■□□□□ 0.27
PDLIM5-202ENST00000318007 ADCY5O95622 1261 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 GNA14O95837 355 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 MLH1P40692 756 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 MRE11P49959 708 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 KCNH2Q12809 1159 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 MIIPQ5JXC2 388 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 SCARA3Q6AZY7 606 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 INTS8Q75QN2 995 aaKnown RBP16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 TRIM59Q8IWR1 403 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 BORCS6Q96GS4 357 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 FBXL18Q96ME1 805 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 CCDC94Q9BW85 323 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 INPP5FQ9Y2H2 1132 aa16.72■□□□□ 0.27
PDLIM5-202ENST00000318007 LACTBL1A8MY62 500 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 LRRN2O75325 713 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 UPP2O95045 317 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 KLK7P49862 253 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 TFAMQ00059 246 aaKnown RBP16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 UBXN1Q04323 297 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 PPP3CAQ08209 521 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 SLC10A6Q3KNW5 377 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 CBWD6Q4V339 395 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 VWA3BQ502W6 1294 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 CBWD3Q5JTY5 395 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 CBWD5Q5RIA9 395 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 FOXR2Q6PJQ5 311 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms