RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 KRT17Q04695 432 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 BNIP1Q12981 228 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 PADI6Q6TGC4 694 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 SYDE1Q6ZW31 735 aaPredicted RBP20.45■□□□□ 0.87
RTN4-201ENST00000317610 XXYLT1Q8NBI6 393 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 CKAP2Q8WWK9 683 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 NGLY1Q96IV0 654 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 POP1Q99575 1024 aaKnown RBP20.45■□□□□ 0.87
RTN4-201ENST00000317610 PLCD4Q9BRC7 762 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 EHMT1Q9H9B1 1298 aa20.45■□□□□ 0.87
RTN4-201ENST00000317610 LARSQ9P2J5 1176 aaKnown RBP20.45■□□□□ 0.87
RTN4-201ENST00000317610 CYP26A1O43174 497 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 GH2P01242 217 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 STAT2P52630 851 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 PNMA8AQ86V59 439 aaPredicted RBP20.45■□□□□ 0.86
RTN4-201ENST00000317610 SLC47A2Q86VL8 602 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 C7orf43Q8WVR3 580 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 DYDC1Q8WWB3 177 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 MIEF2Q96C03 454 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 ZNF653Q96CK0 615 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 C8orf37Q96NL8 207 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 HSPBP1Q9NZL4 362 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 CD2APQ9Y5K6 639 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 ATRNL1Q5VV63 1379 aa20.45■□□□□ 0.86
RTN4-201ENST00000317610 TTC4O95801 387 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 IVDP26440 423 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 CHKAP35790 457 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 SNRPFP62306 86 aaKnown RBP20.44■□□□□ 0.86
RTN4-201ENST00000317610 FKBP1AP62942 108 aaKnown RBP20.44■□□□□ 0.86
RTN4-201ENST00000317610 PTK6Q13882 451 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 LRRC14Q15048 493 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 PLVAPQ9BX97 442 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 ECT2Q9H8V3 914 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 PRKAG3Q9UGI9 489 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 ZNF646O15015 1829 aaPredicted RBP20.44■□□□□ 0.86
RTN4-201ENST00000317610 CLDN3O15551 220 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 ACSL3O95573 720 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 CREB1P16220 341 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 KCNJ2P63252 427 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 CRYMQ14894 314 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 SGO2Q562F6 1265 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
RTN4-201ENST00000317610 SNF8Q96H20 258 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
RTN4-201ENST00000317610 RIT2Q99578 217 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 SUFUQ9UMX1 484 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 ARL2BPQ9Y2Y0 163 aa20.44■□□□□ 0.86
RTN4-201ENST00000317610 DLATP10515 647 aaKnown RBP20.43■□□□□ 0.86
RTN4-201ENST00000317610 MAN1A1P33908 653 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 MFAP3P55082 362 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 CDR2Q01850 454 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 ACCSLQ4AC99 568 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 PODNQ7Z5L7 613 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 TBC1D31Q96DN5 1066 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 ST6GALNAC4Q9H4F1 302 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 CYP11B1P15538 503 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 IBSPP21815 317 aaPredicted RBP20.43■□□□□ 0.86
RTN4-201ENST00000317610 COPS2P61201 443 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 UBXN2AP68543 259 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 CAV1Q03135 178 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 MKRN3Q13064 507 aaKnown RBP20.43■□□□□ 0.86
RTN4-201ENST00000317610 OTUD6AQ7L8S5 288 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 SPATA21Q7Z572 469 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 SPICE1Q8N0Z3 855 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 MGARPQ8TDB4 240 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 C1orf54Q8WWF1 131 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 STAMBPL1Q96FJ0 436 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 ACP6Q9NPH0 428 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 LGALS13Q9UHV8 139 aa20.43■□□□□ 0.86
RTN4-201ENST00000317610 A0A1B0GUA9 196 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 G3V3G9 751 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 IPO5O00410 1097 aaKnown RBP20.42■□□□□ 0.86
RTN4-201ENST00000317610 PLS3P13797 630 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 ALDH5A1P51649 535 aaPredicted RBP20.42■□□□□ 0.86
RTN4-201ENST00000317610 GTF2BQ00403 316 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 DCAF8Q5TAQ9 597 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 ZSWIM2Q8NEG5 633 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 DDX1Q92499 740 aaKnown RBP20.42■□□□□ 0.86
RTN4-201ENST00000317610 RANBP17Q9H2T7 1088 aaKnown RBP20.42■□□□□ 0.86
RTN4-201ENST00000317610 ARHGEF3Q9NR81 526 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 NUGGCQ68CJ6 796 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 ACAD10Q6JQN1 1059 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 HELQQ8TDG4 1101 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 MAIP1Q8WWC4 291 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 ASIC3Q9UHC3 531 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 COQ4Q9Y3A0 265 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 CEP83Q9Y592 693 aa20.42■□□□□ 0.86
RTN4-201ENST00000317610 COL2A1P02458 1487 aaPredicted RBP20.41■□□□□ 0.86
RTN4-201ENST00000317610 SORBS3O60504 671 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 ADRB2P07550 413 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 SLC8A3P57103 927 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 MPP2Q14168 576 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 PPM1KQ8N3J5 372 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 MAB21L3Q8N8X9 362 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 AGAP11Q8TF27 550 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 SEMA4DQ92854 862 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 C15orf41Q9Y2V0 281 aa20.41■□□□□ 0.86
RTN4-201ENST00000317610 ADGRA3Q8IWK6 1321 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms