RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CENPKQ9BS16 269 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TRABDQ9H4I3 376 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 GCNT3O95395 438 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 CLCN2P51788 898 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ZBTB16Q05516 673 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 RCN2Q14257 317 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 AOC3Q16853 763 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 DHX38Q92620 1227 aaKnown RBP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 BHMT2Q9H2M3 363 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 PARVGQ9HBI0 331 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ERVK-5Q9HDB9 667 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 AVENQ9NQS1 362 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TMEM260Q9NX78 707 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MTMR4Q9NYA4 1195 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ANKFY1Q9P2R3 1169 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 PNMA3Q9UL41 463 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 KIF1AQ12756 1690 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 AP1G2O75843 785 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TSHRP16473 764 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MFAP3P55082 362 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 KRT17Q04695 432 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 PTPROQ16827 1216 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 TRMT5Q32P41 509 aaKnown RBP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 RNF207Q6ZRF8 634 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF564Q8TBZ8 553 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 KCNV2Q8TDN2 545 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MAML1Q92585 1016 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 SLC7A6OSQ96CW6 309 aaPredicted RBP5.09□□□□□ -1.59
PTPN13-201ENST00000316707 REEP2Q9BRK0 252 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 VPS11Q9H270 941 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 NINJ2Q9NZG7 142 aa5.09□□□□□ -1.59
PTPN13-201ENST00000316707 MARF1Q9Y4F3 1742 aaKnown RBP5.09□□□□□ -1.6
PTPN13-201ENST00000316707 DNAJC6O75061 913 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 TGDSO95455 350 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 PHBP35232 272 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 TBCCQ15814 346 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 C15orf52Q6ZUT6 534 aaKnown RBP5.09□□□□□ -1.6
PTPN13-201ENST00000316707 ADAT2Q7Z6V5 191 aaKnown RBP5.09□□□□□ -1.6
PTPN13-201ENST00000316707 MAPKAPK5Q8IW41 473 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 ST13P4Q8IZP2 240 aaPredicted RBP5.09□□□□□ -1.6
PTPN13-201ENST00000316707 FAM81AQ8TBF8 368 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 RMDN2Q96LZ7 410 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 RBM15Q96T37 977 aaKnown RBP eCLIP5.09□□□□□ -1.6
PTPN13-201ENST00000316707 DENND2DQ9H6A0 471 aaPredicted RBP5.09□□□□□ -1.6
PTPN13-201ENST00000316707 DMAC2Q9NW81 257 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 ZHX2Q9Y6X8 837 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 SPATA31A1Q5TZJ5 1347 aa5.09□□□□□ -1.6
PTPN13-201ENST00000316707 KCNA3P22001 575 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CIITAP33076 1130 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 POLE2P56282 527 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MOGSQ13724 837 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 TPTE2Q6XPS3 522 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ENOSF1Q7L5Y1 443 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ADGRG6Q86SQ4 1221 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PDCD7Q8N8D1 485 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 DENND1AQ8TEH3 1009 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 TGFBRAP1Q8WUH2 860 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 NSL1Q96IY1 281 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF184Q99676 751 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 GORASP1Q9BQQ3 440 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 DNAJC18Q9H819 358 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 LRRC4BQ9NT99 713 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF536O15090 1300 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L5A8MUK1 530 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 GYG2O15488 501 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 MAGEC1O60732 1142 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CLK2P49760 499 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ITGA8P53708 1063 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CACNA2D1P54289 1103 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ITGA9Q13797 1035 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 DNAL1Q4LDG9 190 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ZC3H12AQ5D1E8 599 aaKnown RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 FAM178BQ8IXR5 827 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 C12orf56Q8IXR9 622 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 EZH1Q92800 747 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF653Q96CK0 615 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 OPTNQ96CV9 577 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ARHGEF26Q96DR7 871 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 IFT43Q96FT9 208 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 HIC2Q96JB3 615 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 SYT15Q9BQS2 421 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 AMNQ9BXJ7 453 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CHKBQ9Y259 395 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PCDHA1Q9Y5I3 950 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 GLI3P10071 1580 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PENKP01210 267 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 IL1BP01584 269 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 CYP1A2P05177 515 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ARFIP2P53365 341 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PPARDQ03181 441 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 BFSP1Q12934 665 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 KRT72Q14CN4 511 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 GDAP1Q8TB36 358 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PTPRN2Q92932 1015 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 PPP2R3CQ969Q6 453 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 COA7Q96BR5 231 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 SLC4A9Q96Q91 983 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 BTBD10Q9BSF8 475 aa5.08□□□□□ -1.6
PTPN13-201ENST00000316707 ASCC2Q9H1I8 757 aaPredicted RBP5.08□□□□□ -1.6
PTPN13-201ENST00000316707 RANBP17Q9H2T7 1088 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms