RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 FNBP1Q96RU3 617 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 SMARCAD1Q9H4L7 1026 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 GBA2Q9HCG7 927 aaPredicted RBP19.82■□□□□ 0.76
CCDC43-201ENST00000315286 OSGEPQ9NPF4 335 aa19.82■□□□□ 0.76
CCDC43-201ENST00000315286 ADGRA2Q96PE1 1338 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 SASH3O75995 380 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 TUBBP07437 444 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 CHRNB2P17787 502 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 TAPT1Q6NXT6 567 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 SLFN11Q7Z7L1 901 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 NOP9Q86U38 636 aaKnown RBP19.81■□□□□ 0.76
CCDC43-201ENST00000315286 SLC47A2Q86VL8 602 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 MMGT1Q8N4V1 131 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 SLC35G2Q8TBE7 412 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 TCP11Q8WWU5 503 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 CTNNBL1Q8WYA6 563 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-201ENST00000315286 ABCB6Q9NP58 842 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 RBAKQ9NYW8 714 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-201ENST00000315286 NOCTQ9UK39 431 aaKnown RBP19.81■□□□□ 0.76
CCDC43-201ENST00000315286 PTPRJQ12913 1337 aa19.81■□□□□ 0.76
CCDC43-201ENST00000315286 EVPLQ92817 2033 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 LDHAP00338 332 aaKnown RBP19.8■□□□□ 0.76
CCDC43-201ENST00000315286 C4BPAP04003 597 aaKnown RBP19.8■□□□□ 0.76
CCDC43-201ENST00000315286 EFNA5P52803 228 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 RPS6KA1Q15418 735 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 PTPROQ16827 1216 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 ZACNQ401N2 412 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 CFAP221Q4G0U5 840 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 BEND6Q5SZJ8 279 aaPredicted RBP19.8■□□□□ 0.76
CCDC43-201ENST00000315286 ANKRD23Q86SG2 305 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 DHX38Q92620 1227 aaKnown RBP19.8■□□□□ 0.76
CCDC43-201ENST00000315286 ARHGEF26Q96DR7 871 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 THAP2Q9H0W7 228 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 TRPC6Q9Y210 931 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 NCANO14594 1321 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 ANKRD62A6NC57 917 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 ATP8B1O43520 1251 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 GAS2O43903 313 aaKnown RBP19.8■□□□□ 0.76
CCDC43-201ENST00000315286 MSCO60682 206 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 KIF4AO95239 1232 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 SLC26A2P50443 739 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 ARHGAP1Q07960 439 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 MXD4Q14582 209 aaPredicted RBP19.8■□□□□ 0.76
CCDC43-201ENST00000315286 SEZ6Q53EL9 994 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 TAF3Q5VWG9 929 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 RNF149Q8NC42 400 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 LMBR1Q8WVP7 490 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 RFFLQ8WZ73 363 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 ZBTB10Q96DT7 871 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 PCDHB18PQ96TA0 734 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 FUT8Q9BYC5 575 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 CCDC113Q9H0I3 377 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 RNF14Q9UBS8 474 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 MORF4L1Q9UBU8 362 aa19.8■□□□□ 0.76
CCDC43-201ENST00000315286 TARSL2A2RTX5 802 aaKnown RBP19.79■□□□□ 0.76
CCDC43-201ENST00000315286 HARSP12081 509 aaKnown RBP19.79■□□□□ 0.76
CCDC43-201ENST00000315286 GCLCP48506 637 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-201ENST00000315286 FKBP1BP68106 108 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 TDRD10Q5VZ19 366 aaKnown RBP19.79■□□□□ 0.76
CCDC43-201ENST00000315286 CDCA2Q69YH5 1023 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-201ENST00000315286 MAMDC4Q6UXC1 1216 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 ZPBP2Q6X784 338 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 EXOC8Q8IYI6 725 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 ISCUQ9H1K1 167 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 RNPEPQ9H4A4 650 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 SUCLA2Q9P2R7 463 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-201ENST00000315286 CLDN3O15551 220 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 HBP1O60381 514 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 ERLIN1O75477 346 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 FTLP02792 175 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-201ENST00000315286 DAAM2Q86T65 1068 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 RHPN2Q8IUC4 686 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 KRT222Q8N1A0 295 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 STXBP5LQ9Y2K9 1186 aa19.79■□□□□ 0.76
CCDC43-201ENST00000315286 KCNK3O14649 394 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 STRNO43815 780 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 ZC3H11AO75152 810 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCDC43-201ENST00000315286 HLA-DRAP01903 254 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 GJB1P08034 283 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 CYP11B1P15538 503 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 GCNT1Q02742 428 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 LAMC2Q13753 1193 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 SPRYD7Q5W111 196 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 PEX26Q7Z412 305 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 ABRAQ8N0Z2 381 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 TAF4BQ92750 862 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 PTPN18Q99952 460 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 LRRC1Q9BTT6 524 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 MRPL4Q9BYD3 311 aaKnown RBP19.78■□□□□ 0.76
CCDC43-201ENST00000315286 RRAGCQ9HB90 399 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 RBM12Q9NTZ6 932 aaKnown RBP19.78■□□□□ 0.76
CCDC43-201ENST00000315286 IVNS1ABPQ9Y6Y0 642 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 CNTNAP2Q9UHC6 1331 aa19.78■□□□□ 0.76
CCDC43-201ENST00000315286 BUB1BO60566 1050 aaPredicted RBP19.77■□□□□ 0.76
CCDC43-201ENST00000315286 ZMYND10O75800 440 aa19.77■□□□□ 0.76
CCDC43-201ENST00000315286 CELF2O95319 508 aaKnown RBP19.77■□□□□ 0.76
CCDC43-201ENST00000315286 VNN1O95497 513 aa19.77■□□□□ 0.76
CCDC43-201ENST00000315286 MMEP08473 750 aa19.77■□□□□ 0.76
CCDC43-201ENST00000315286 PLA2G4AP47712 749 aa19.77■□□□□ 0.76
CCDC43-201ENST00000315286 BIRC3Q13489 604 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms