RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 VAMP7P51809 220 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 BNIP1Q12981 228 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 MPP2Q14168 576 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 EPC2Q52LR7 807 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 C1orf220Q5T0J3 134 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 SH3BP5LQ7L8J4 393 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 GMCL1P1Q8NEA9 526 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 ZNF564Q8TBZ8 553 aaPredicted RBP14.4□□□□□ -0.1
SKA3-202ENST00000314759 C1orf54Q8WWF1 131 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 SLC5A5Q92911 643 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 SERPINB12Q96P63 405 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 FAM167BQ9BTA0 163 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.39□□□□□ -0.11
SKA3-202ENST00000314759 CLDN3O15551 220 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 HIP1RO75146 1068 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 SUN1O94901 812 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 DLATP10515 647 aaKnown RBP14.39□□□□□ -0.11
SKA3-202ENST00000314759 GZMAP12544 262 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 PRELPP51888 382 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 UBXN2AP68543 259 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 CAPRIN2Q6IMN6 1127 aaKnown RBP14.39□□□□□ -0.11
SKA3-202ENST00000314759 MIS18BP1Q6P0N0 1132 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 INTS8Q75QN2 995 aaKnown RBP14.39□□□□□ -0.11
SKA3-202ENST00000314759 SLC47A2Q86VL8 602 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 ZSWIM2Q8NEG5 633 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 KCNV2Q8TDN2 545 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 KLHL29Q96CT2 875 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 PI4KBQ9UBF8 816 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 GAS7O60861 476 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 GH1P01241 217 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 GYS1P13807 737 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 ABL2P42684 1182 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 COPS2P61201 443 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 CETN1Q12798 172 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 RHBDF2Q6PJF5 856 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 ANKRD42Q8N9B4 389 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 ZC3H12CQ9C0D7 883 aaKnown RBP14.39□□□□□ -0.11
SKA3-202ENST00000314759 KCNK9Q9NPC2 374 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 KCND2Q9NZV8 630 aa14.39□□□□□ -0.11
SKA3-202ENST00000314759 CYP26A1O43174 497 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 CFBP00751 764 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 BMP3P12645 472 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 RWDD2BP57060 319 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 KRT17Q04695 432 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 SNX1Q13596 522 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 TATDN1Q6P1N9 297 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 FITM2Q8N6M3 262 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 GDAP1Q8TB36 358 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 PLEKHO2Q8TD55 490 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 CKAP2Q8WWK9 683 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 CBWD1Q9BRT8 395 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 WHRNQ9P202 907 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 MYH11P35749 1972 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 GJB6O95452 261 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 CYP1A2P05177 515 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 CCND1P24385 295 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 CRKP46108 304 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 JAG1P78504 1218 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 FMO1Q01740 532 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 MYBPC2Q14324 1141 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 NSMFQ6X4W1 530 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 TMEM179Q6ZVK1 233 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 SPATA21Q7Z572 469 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 SP8Q8IXZ3 490 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 PSPC1Q8WXF1 523 aaKnown RBP14.38□□□□□ -0.11
SKA3-202ENST00000314759 SLCO2A1Q92959 643 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 UNC45AQ9H3U1 944 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 DNAJC17Q9NVM6 304 aaKnown RBP14.38□□□□□ -0.11
SKA3-202ENST00000314759 ADAM22Q9P0K1 906 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 FAM198AQ9UFP1 575 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 PRR12Q9ULL5 1215 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 K7ENM7 598 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 PPEF1O14829 653 aaPredicted RBP14.38□□□□□ -0.11
SKA3-202ENST00000314759 FSCN2O14926 492 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 ADRA2BP18089 450 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 IVDP26440 423 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 BIRC2Q13490 618 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 LTBP1Q14766 1721 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 KYNUQ16719 465 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 QSER1Q2KHR3 1735 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 GBP7Q8N8V2 638 aaPredicted RBP14.38□□□□□ -0.11
SKA3-202ENST00000314759 VTI1AQ96AJ9 217 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 LXNQ9BS40 222 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 ARHGEF3Q9NR81 526 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 PRKAG3Q9UGI9 489 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 ARL2BPQ9Y2Y0 163 aa14.38□□□□□ -0.11
SKA3-202ENST00000314759 SIPA1L1O43166 1804 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 P4HA2O15460 535 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 TTC4O95801 387 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 MSH2P43246 934 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 MAP2K1Q02750 393 aaPredicted RBP14.37□□□□□ -0.11
SKA3-202ENST00000314759 RASA3Q14644 834 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 SGO2Q562F6 1265 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ANKRD20A2Q5SQ80 823 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ANKRD20A1Q5TYW2 823 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ANKRD20A3Q5VUR7 823 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 CYP4X1Q8N118 509 aa14.37□□□□□ -0.11
SKA3-202ENST00000314759 ZNF653Q96CK0 615 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms