RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ALCAMQ13740 583 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 PPP2R5EQ16537 467 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 RNF207Q6ZRF8 634 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 POMGNT1Q8WZA1 660 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 XPO6Q96QU8 1125 aaKnown RBP27.18■■□□□ 1.94
HOXB3-201ENST00000311626 WNT8AQ9H1J5 351 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 PCYOX1Q9UHG3 505 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 RGS16O15492 202 aaPredicted RBP27.18■■□□□ 1.94
HOXB3-201ENST00000311626 EIF3BP55884 814 aaKnown RBP27.18■■□□□ 1.94
HOXB3-201ENST00000311626 CCDC121Q6ZUS5 278 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 HOOK3Q86VS8 718 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 SPATS2Q86XZ4 545 aaKnown RBP27.18■■□□□ 1.94
HOXB3-201ENST00000311626 CPA5Q8WXQ8 436 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 DDX23Q9BUQ8 820 aaKnown RBP27.18■■□□□ 1.94
HOXB3-201ENST00000311626 KMT5AQ9NQR1 393 aa27.18■■□□□ 1.94
HOXB3-201ENST00000311626 FSBPO95073 299 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 CYP1A2P05177 515 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 PDE6CP51160 858 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 PSMC5P62195 406 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 CCDC13Q8IYE1 715 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 HERPUD2Q9BSE4 406 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 ADAM7Q9H2U9 754 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 DNM1LO00429 736 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 GZMAP12544 262 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 DRD4P21917 467 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 PDE4CQ08493 712 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 SV2AQ7L0J3 742 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 NT5C1BQ96P26 610 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 RAB20Q9NX57 234 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 RIPK3Q9Y572 518 aa27.17■■□□□ 1.94
HOXB3-201ENST00000311626 ADGRA3Q8IWK6 1321 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 EGFRP00533 1210 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 NUDT17P0C025 328 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 IFNAR2P48551 515 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 CDR2Q01850 454 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 PPP1R7Q15435 360 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 MCF2L2Q86YR7 1114 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 CNPY4Q8N129 248 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 PWWP2AQ96N64 755 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 FAM213AQ9BRX8 229 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 GOLGA6L7A0A1B0GV03 622 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 WNT10BO00744 389 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 C4orf19Q8IY42 314 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 DDX1Q92499 740 aaKnown RBP27.16■■□□□ 1.94
HOXB3-201ENST00000311626 TBC1D22BQ9NU19 505 aa27.16■■□□□ 1.94
HOXB3-201ENST00000311626 GRIN3BO60391 1043 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 VPS41P49754 854 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 DRG2P55039 364 aaKnown RBP27.15■■□□□ 1.94
HOXB3-201ENST00000311626 ARHGEF16Q5VV41 709 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 OTUD6AQ7L8S5 288 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 FBXL13Q8NEE6 735 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 CEP170P1Q96L14 293 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 PDCD2LQ9BRP1 358 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 DEFB129Q9H1M3 183 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 CHST7Q9NS84 486 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 GABBR1Q9UBS5 961 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 PGAP2Q9UHJ9 254 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 ANAPC7Q9UJX3 599 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 TBC1D12O60347 775 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 ACSL3O95573 720 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 RWDD2BP57060 319 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 ACTN3Q08043 901 aaPredicted RBP27.15■■□□□ 1.94
HOXB3-201ENST00000311626 DMP1Q13316 513 aaPredicted RBP27.15■■□□□ 1.94
HOXB3-201ENST00000311626 ERMARDQ5T6L9 678 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 CACNA2D3Q8IZS8 1091 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 SLC38A10Q9HBR0 1119 aa27.15■■□□□ 1.94
HOXB3-201ENST00000311626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.15■■□□□ 1.94
HOXB3-201ENST00000311626 MTRF1LQ9UGC7 380 aaKnown RBP27.15■■□□□ 1.94
HOXB3-201ENST00000311626 O00370 1275 aa27.14■■□□□ 1.94
HOXB3-201ENST00000311626 ZNF862O60290 1169 aa27.14■■□□□ 1.94
HOXB3-201ENST00000311626 GTF2A1P52655 376 aaPredicted RBP27.14■■□□□ 1.94
HOXB3-201ENST00000311626 TMEM8AQ9HCN3 771 aa27.14■■□□□ 1.94
HOXB3-201ENST00000311626 MTUS1Q9ULD2 1270 aa27.14■■□□□ 1.94
HOXB3-201ENST00000311626 CTDP1Q9Y5B0 961 aaPredicted RBP27.14■■□□□ 1.94
HOXB3-201ENST00000311626 ATXN2Q99700 1313 aaKnown RBP27.14■■□□□ 1.94
HOXB3-201ENST00000311626 WDR64B1ANS9 1081 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 PODXLO00592 558 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 RIPK2O43353 540 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 PAEPP09466 180 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 SMTNP53814 917 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 LONRF1Q17RB8 773 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 NIPA1Q7RTP0 329 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 YTHDF3Q7Z739 585 aaKnown RBP27.14■■□□□ 1.93
HOXB3-201ENST00000311626 PRMT1Q99873 361 aaKnown RBP27.14■■□□□ 1.93
HOXB3-201ENST00000311626 PXMP2Q9NR77 195 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 GTF3C4Q9UKN8 822 aa27.14■■□□□ 1.93
HOXB3-201ENST00000311626 LYPLA2O95372 231 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 CFHP08603 1231 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 MNAT1P51948 309 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 WNT7BP56706 349 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 MTMR2Q13614 643 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 SPOPLQ6IQ16 392 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 PSPC1Q8WXF1 523 aaKnown RBP27.13■■□□□ 1.93
HOXB3-201ENST00000311626 BICD1Q96G01 975 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 HEMGNQ9BXL5 484 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 FAM129AQ9BZQ8 928 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 FZD1Q9UP38 647 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 MTA2O94776 668 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 CHKAP35790 457 aa27.13■■□□□ 1.93
HOXB3-201ENST00000311626 BAATQ14032 418 aaPredicted RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms