RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 STMN2Q93045 179 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 MROH8Q9H579 483 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 MAGEF1Q9HAY2 307 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 ABCF3Q9NUQ8 709 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 ZNF214Q9UL59 606 aaPredicted RBP11.67□□□□□ -0.54
LSM3-201ENST00000306024 DRD4P21917 467 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
LSM3-201ENST00000306024 SREBF2Q12772 1141 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 USP4Q13107 963 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 LDLRAD1Q5T700 205 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 STXBP4Q6ZWJ1 553 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 NEK9Q8TD19 979 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 IQCDQ96DY2 449 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 ZNF570Q96NI8 536 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 EIF2AK1Q9BQI3 630 aaKnown RBP11.67□□□□□ -0.54
LSM3-201ENST00000306024 FAM129AQ9BZQ8 928 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 ISCUQ9H1K1 167 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 NKIRAS1Q9NYS0 192 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 A0A087X0B3 334 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 LRRC10BA6NIK2 292 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 LGR5O75473 907 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 SKIP12755 728 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 OTUD6AQ7L8S5 288 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 SAMD3Q8N6K7 520 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 SLC17A8Q8NDX2 589 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 IL31RAQ8NI17 732 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 P2RX5Q93086 422 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 DDX27Q96GQ7 796 aaKnown RBP11.67□□□□□ -0.54
LSM3-201ENST00000306024 NACC1Q96RE7 527 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 TLR10Q9BXR5 811 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 FAM114A2Q9NRY5 505 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 AMACRQ9UHK6 382 aa11.67□□□□□ -0.54
LSM3-201ENST00000306024 ARFGEF1Q9Y6D6 1849 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 FAM170AA1A519 330 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 DPPA5A6NC42 116 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 WDR64B1ANS9 1081 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 TNPO2O14787 897 aaKnown RBP11.66□□□□□ -0.54
LSM3-201ENST00000306024 SART1O43290 800 aaKnown RBP11.66□□□□□ -0.54
LSM3-201ENST00000306024 FECHP22830 423 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 HOXA7P31268 230 aaPredicted RBP11.66□□□□□ -0.54
LSM3-201ENST00000306024 KRT76Q01546 638 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 PGM5Q15124 567 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 SEPT7Q16181 437 aaKnown RBP11.66□□□□□ -0.54
LSM3-201ENST00000306024 SPATA21Q7Z572 469 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 MYCT1Q8N699 235 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 ATP6V0A1Q93050 837 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 KCNH4Q9UQ05 1017 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 GSTTP1A0A1W2PQM5 241 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 GRID2IPA4D2P6 1211 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 CNGA1P29973 690 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 ZNF131P52739 623 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 COPS2P61201 443 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 ITIH4Q14624 930 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 CDCA2Q69YH5 1023 aaPredicted RBP11.66□□□□□ -0.54
LSM3-201ENST00000306024 ZNF449Q6P9G9 518 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 GDAP1Q8TB36 358 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 FAM81AQ8TBF8 368 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 LBHD1Q9BQE6 289 aaPredicted RBP11.66□□□□□ -0.54
LSM3-201ENST00000306024 USP15Q9Y4E8 981 aaPredicted RBP11.66□□□□□ -0.54
LSM3-201ENST00000306024 ZNF536O15090 1300 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 M0R2N6 131 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 RIPK1Q13546 671 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 PCNX4Q63HM2 1172 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 CROCCP2Q86T23 111 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 MREGQ8N565 214 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 CLEC4DQ8WXI8 215 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 BRI3BPQ8WY22 251 aa11.66□□□□□ -0.54
LSM3-201ENST00000306024 ASB14A6NK59 587 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 ZBTB48P10074 688 aaPredicted RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 TNFRSF8P28908 595 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 TPP2P29144 1249 aaPredicted RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 SERPINB4P48594 390 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 POLR2FP61218 127 aaKnown RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 ADCY1Q08828 1119 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 BYSLQ13895 437 aaKnown RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 RCN2Q14257 317 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 KCTD19Q17RG1 926 aaPredicted RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 DNAJC9Q8WXX5 260 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 DTNBP1Q96EV8 351 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 TXLNGQ9NUQ3 528 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 FGFR1OP2Q9NVK5 253 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.65□□□□□ -0.54
LSM3-201ENST00000306024 CNOT8Q9UFF9 292 aaKnown RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 A8MUI8 341 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 ASIC2Q16515 512 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 Q4G0T1 1027 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 XRRA1Q6P2D8 792 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 PDXDC2PQ6P474 469 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 CYFIP1Q7L576 1253 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 NELFCDQ8IXH7 590 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 MAIP1Q8WWC4 291 aa11.65□□□□□ -0.54
LSM3-201ENST00000306024 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.65□□□□□ -0.54
LSM3-201ENST00000306024 ABTB1Q969K4 478 aaPredicted RBP11.65□□□□□ -0.54
LSM3-201ENST00000306024 RIT2Q99578 217 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms