RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 CUL1Q13616 776 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 XRRA1Q6P2D8 792 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 ZDHHC14Q8IZN3 488 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 RDM1Q8NG50 284 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 ZNF564Q8TBZ8 553 aaPredicted RBP20.05■□□□□ 0.8
RNF139-201ENST00000303545 ASAP3Q8TDY4 903 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 TMEM174Q8WUU8 243 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 NTPCRQ9BSD7 190 aaKnown RBP20.05■□□□□ 0.8
RNF139-201ENST00000303545 ANKFY1Q9P2R3 1169 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 TRPC6Q9Y210 931 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 UTP11Q9Y3A2 253 aaKnown RBP20.05■□□□□ 0.8
RNF139-201ENST00000303545 SUPT20HL2P0C7V6 817 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 GPC3P51654 580 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 DR1Q01658 176 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 SUPT20HL1Q3ZLR7 823 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 MIS18BP1Q6P0N0 1132 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 TRIM7Q9C029 511 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 HAPLN2Q9GZV7 340 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 MTFR1LQ9H019 292 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 CARD9Q9H257 536 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 BCCIPQ9P287 314 aaKnown RBP eCLIP20.05■□□□□ 0.8
RNF139-201ENST00000303545 AFG3L2Q9Y4W6 797 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 PTPRJQ12913 1337 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 C19orf81C9J6K1 198 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 MAFGO15525 162 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 SPOPO43791 374 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 HPDP32754 393 aaPredicted RBP20.04■□□□□ 0.8
RNF139-201ENST00000303545 SNRPFP62306 86 aaKnown RBP20.04■□□□□ 0.8
RNF139-201ENST00000303545 POU5F1Q01860 360 aaKnown RBP20.04■□□□□ 0.8
RNF139-201ENST00000303545 GNPTABQ3T906 1256 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 DAB2IPQ5VWQ8 1189 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 APOBEC3FQ8IUX4 373 aaKnown RBP20.04■□□□□ 0.8
RNF139-201ENST00000303545 MREGQ8N565 214 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 SLC17A8Q8NDX2 589 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 MCPH1Q8NEM0 835 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 CPA5Q8WXQ8 436 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 SLITRK6Q9H5Y7 841 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 SSC5DA1L4H1 1573 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 PYGMP11217 842 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 CTNNA1P35221 906 aaKnown RBP20.04■□□□□ 0.8
RNF139-201ENST00000303545 C12orf42Q96LP6 360 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 ZSWIM1Q9BR11 485 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 ZNF302Q9NR11 478 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 CWC15Q9P013 229 aaKnown RBP20.04■□□□□ 0.8
RNF139-201ENST00000303545 PNMA2Q9UL42 364 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 SNX24Q9Y343 169 aa20.04■□□□□ 0.8
RNF139-201ENST00000303545 ZEB2O60315 1214 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 EDN1P05305 212 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 OAZ1P54368 228 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 BIRC3Q13489 604 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 UBL4BQ8N7F7 174 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 FBXL18Q96ME1 805 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 LCTP09848 1927 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 PTENP60484 403 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 CDR2Q01850 454 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 GUCY1A3Q02108 690 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 DHX9Q08211 1270 aaKnown RBP20.03■□□□□ 0.8
RNF139-201ENST00000303545 STXBP2Q15833 593 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 DDX1Q92499 740 aaKnown RBP20.03■□□□□ 0.8
RNF139-201ENST00000303545 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 ARHGAP28Q9P2N2 729 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 PTPN22Q9Y2R2 807 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 COQ4Q9Y3A0 265 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 DAAM1Q9Y4D1 1078 aa20.03■□□□□ 0.8
RNF139-201ENST00000303545 CFHP08603 1231 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 XKR3Q5GH77 459 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 TMC2Q8TDI7 906 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 ATP8B4Q8TF62 1192 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 HVCN1Q96D96 273 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 FNBP1Q96RU3 617 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 TARS2Q9BW92 718 aaKnown RBP20.02■□□□□ 0.8
RNF139-201ENST00000303545 GPRC5DQ9NZD1 345 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 BTBD7Q9P203 1132 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 ATP8A1Q9Y2Q0 1164 aa20.02■□□□□ 0.8
RNF139-201ENST00000303545 GOLGA6L10A0A0M3HER8 536 aa20.02■□□□□ 0.79
RNF139-201ENST00000303545 SHOX2O60902 331 aaPredicted RBP20.02■□□□□ 0.79
RNF139-201ENST00000303545 DRP2Q13474 957 aa20.02■□□□□ 0.79
RNF139-201ENST00000303545 VGLL4Q14135 290 aa20.02■□□□□ 0.79
RNF139-201ENST00000303545 BRDTQ58F21 947 aaPredicted RBP20.02■□□□□ 0.79
RNF139-201ENST00000303545 C11orf63Q6NUN7 778 aa20.02■□□□□ 0.79
RNF139-201ENST00000303545 PASD1Q8IV76 773 aa20.02■□□□□ 0.79
RNF139-201ENST00000303545 ZNF668Q96K58 619 aaPredicted RBP20.02■□□□□ 0.79
RNF139-201ENST00000303545 PAGR1Q9BTK6 254 aa20.02■□□□□ 0.79
RNF139-201ENST00000303545 CNOT8Q9UFF9 292 aaKnown RBP20.02■□□□□ 0.79
RNF139-201ENST00000303545 TTC7AQ9ULT0 858 aaPredicted RBP20.02■□□□□ 0.79
RNF139-201ENST00000303545 GRIN2DO15399 1336 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 NFASCO94856 1347 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 USP2O75604 605 aaPredicted RBP20.01■□□□□ 0.79
RNF139-201ENST00000303545 IVLP07476 585 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 GLRA2P23416 452 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 KCNJ1P48048 391 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 STRN3Q13033 797 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 TTC27Q6P3X3 843 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 AGO2Q9UKV8 859 aaKnown RBP20.01■□□□□ 0.79
RNF139-201ENST00000303545 SYNGAP1Q96PV0 1343 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 TTLL13PA6NNM8 815 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 BHMG1C9JSJ3 638 aaPredicted RBP20.01■□□□□ 0.79
RNF139-201ENST00000303545 GRIN3BO60391 1043 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 RPS6KA5O75582 802 aa20.01■□□□□ 0.79
RNF139-201ENST00000303545 GZMAP12544 262 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms