RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RBAKQ9NYW8 714 aaPredicted RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 NOC2LQ9Y3T9 749 aaKnown RBP26.75■■□□□ 1.87
GTF2A1-201ENST00000298173 CASP14P31944 242 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 GTF2H1P32780 548 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 THPOP40225 353 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 FXR1P51114 621 aaKnown RBP eCLIP26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 CEP120Q8N960 986 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 IQCDQ96DY2 449 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 KCNF1Q9H3M0 494 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 CAPN11Q9UMQ6 739 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 NOD1Q9Y239 953 aa26.74■■□□□ 1.87
GTF2A1-201ENST00000298173 TTC26A0AVF1 554 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 CAND2O75155 1236 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 NOL4O94818 638 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 PON1P27169 355 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 EXOC3L4Q17RC7 722 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 GBP6Q6ZN66 633 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 FAM228AQ86W67 206 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 THNSL1Q8IYQ7 743 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 CCDC150Q8NCX0 1101 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 CPLX3Q8WVH0 158 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 TMEM117Q9H0C3 514 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 MMRN2Q9H8L6 949 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 PDE11AQ9HCR9 933 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 ANK1P16157 1881 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 EPHB6O15197 1021 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 STX10O60499 249 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 N4BP1O75113 896 aaKnown RBP26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 SLC9A1P19634 815 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 GCLMP48507 274 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 ADKP55263 362 aaKnown RBP26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 GOLGA8FQ08AF8 430 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 GOLGA8DPQ0D2H9 430 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 NOTUMQ6P988 496 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 LMO3Q8TAP4 145 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 ZNF516Q92618 1163 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 PCMTD1Q96MG8 357 aaPredicted RBP26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 ZNF830Q96NB3 372 aaPredicted RBP26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 PLCB1Q9NQ66 1216 aa26.73■■□□□ 1.87
GTF2A1-201ENST00000298173 A0A1W2PQJ5 194 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 AKR1B15C9JRZ8 316 aaPredicted RBP26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 CTSHP09668 335 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 TRIM21P19474 475 aaKnown RBP26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 KYAT1Q16773 422 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 SLC27A1Q6PCB7 646 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 C15orf39Q6ZRI6 1047 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 ADPGKQ9BRR6 497 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 EDEM3Q9BZQ6 932 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 FAM207AQ9NSI2 230 aaPredicted RBP26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 COQ4Q9Y3A0 265 aa26.72■■□□□ 1.87
GTF2A1-201ENST00000298173 MFAP3LO75121 409 aa26.71■■□□□ 1.87
GTF2A1-201ENST00000298173 DLATP10515 647 aaKnown RBP26.71■■□□□ 1.87
GTF2A1-201ENST00000298173 ENOX2Q16206 610 aaKnown RBP26.71■■□□□ 1.87
GTF2A1-201ENST00000298173 FAM126BQ8IXS8 530 aa26.71■■□□□ 1.87
GTF2A1-201ENST00000298173 TMEM192Q8IY95 271 aa26.71■■□□□ 1.87
GTF2A1-201ENST00000298173 TMEM8AQ9HCN3 771 aa26.71■■□□□ 1.87
GTF2A1-201ENST00000298173 CD4P01730 458 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 TFRCP02786 760 aaKnown RBP26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 CLTAP09496 248 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 STAG3L1P0CL83 205 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 MYL7Q01449 175 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 DCAF4L1Q3SXM0 396 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 KRT39Q6A163 491 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 TRAF7Q6Q0C0 670 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 SV2AQ7L0J3 742 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 FNBP1Q96RU3 617 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 LSM14BQ9BX40 385 aaKnown RBP26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 OSBPL7Q9BZF2 842 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 TMX1Q9H3N1 280 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 SIX2Q9NPC8 291 aa26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 TOPORSQ9NS56 1045 aaPredicted RBP26.7■■□□□ 1.87
GTF2A1-201ENST00000298173 MEFVO15553 781 aaPredicted RBP26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 RPS6KA5O75582 802 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 C4BPAP04003 597 aaKnown RBP26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 GJA8P48165 433 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 LRMPQ12912 555 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 SURF1Q15526 300 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 EPC2Q52LR7 807 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 FBXO47Q5MNV8 452 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 ZNF618Q5T7W0 954 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 CNGA4Q8IV77 575 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 EHBP1Q8NDI1 1231 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 NEK11Q8NG66 645 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 GANQ9H2C0 597 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 GCNT4Q9P109 453 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 ST3GAL5Q9UNP4 418 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.7■■□□□ 1.863e-7■□□□□ 10.2
GTF2A1-201ENST00000298173 SQORQ9Y6N5 450 aa26.7■■□□□ 1.86
GTF2A1-201ENST00000298173 PTPRJQ12913 1337 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 TPM1P09493 284 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 CKBP12277 381 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 GRM5P41594 1212 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 MXI1P50539 228 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 OSTNP61366 133 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 APBA1Q02410 837 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 UBXN11Q5T124 520 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 TRIM65Q6PJ69 517 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 APBB1IPQ7Z5R6 666 aaPredicted RBP26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 CCDC51Q96ER9 411 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 PANX2Q96RD6 677 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms