RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 RAB27AP51159 221 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 LLGL1Q15334 1064 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 HS2ST1Q7LGA3 356 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 SLFN11Q7Z7L1 901 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 KLHL29Q96CT2 875 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 FMO2Q99518 471 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 LXNQ9BS40 222 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 FAM114A2Q9NRY5 505 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 AMFRQ9UKV5 643 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 COG5Q9UP83 839 aa16.72■□□□□ 0.27
UBAP1-201ENST00000297661 SMIM23A6NLE4 172 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 AHCYL1O43865 530 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 HIP1RO75146 1068 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 YY1P25490 414 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 MYL7Q01449 175 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
UBAP1-201ENST00000297661 SLC30A9Q6PML9 568 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 SEC14L1Q92503 715 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 GLG1Q92896 1179 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 OSBPL1AQ9BXW6 950 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 SLITRK6Q9H5Y7 841 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 ARHGEF10LQ9HCE6 1279 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 ERVK-5Q9HDB9 667 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 SUCLA2Q9P2R7 463 aaPredicted RBP16.71■□□□□ 0.27
UBAP1-201ENST00000297661 UTP11Q9Y3A2 253 aaKnown RBP16.71■□□□□ 0.27
UBAP1-201ENST00000297661 CTNNBL1Q8WYA6 563 aaPredicted RBP16.71■□□□□ 0.27
UBAP1-201ENST00000297661 HES6Q96HZ4 224 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 STK33Q9BYT3 514 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 NSRP1Q9H0G5 558 aaKnown RBP16.71■□□□□ 0.27
UBAP1-201ENST00000297661 SERPINA10Q9UK55 444 aa16.71■□□□□ 0.27
UBAP1-201ENST00000297661 NEFHP12036 1026 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 ATP4AP20648 1035 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 TNFAIP3P21580 790 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 TAF11Q15544 211 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 CEP55Q53EZ4 464 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 BTNL9Q6UXG8 535 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 KAT5Q92993 513 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 GMLQ99445 158 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 TXLNGYQ9BZA5 131 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 GOLGA6L10A0A0M3HER8 536 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 K7ENM7 598 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
UBAP1-201ENST00000297661 ATMINO43313 823 aaPredicted RBP16.7■□□□□ 0.26
UBAP1-201ENST00000297661 SNX3O60493 162 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 MARCKSL1P49006 195 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 RPS6KA3P51812 740 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 ZNF131P52739 623 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 IFI35P80217 286 aaPredicted RBP16.7■□□□□ 0.26
UBAP1-201ENST00000297661 TRAF1Q13077 416 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 DAW1Q8N136 415 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 OGFOD1Q8N543 542 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 KCNV2Q8TDN2 545 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 ALG3Q92685 438 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 EPB41L4BQ9H329 900 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 GOPCQ9HD26 462 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 ADAM22Q9P0K1 906 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
UBAP1-201ENST00000297661 ARHGEF35A5YM69 484 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 PIK3CDO00329 1044 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 MSH2P43246 934 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 GCLMP48507 274 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 CPNE8Q86YQ8 564 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 ARHGEF19Q8IW93 802 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 PGM2Q96G03 612 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 AZI2Q9H6S1 392 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 UBE2TQ9NPD8 197 aaPredicted RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 GPRC5DQ9NZD1 345 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 GTPBP10A4D1E9 387 aaKnown RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 DDX3YO15523 660 aaKnown RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 COPS2P61201 443 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 PPP2R5CQ13362 524 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 ATP8B4Q8TF62 1192 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 RFFLQ8WZ73 363 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 NAF1Q96HR8 494 aaKnown RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 AGBL1Q96MI9 1066 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 CCDC134Q9H6E4 229 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 FRMPD4Q14CM0 1322 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 EMSYQ7Z589 1322 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 RGS16O15492 202 aaPredicted RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 NUDT17P0C025 328 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
UBAP1-201ENST00000297661 BFSP1Q12934 665 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 GNPTABQ3T906 1256 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 SYCE1Q8N0S2 351 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 IL31RAQ8NI17 732 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 RAB17Q9H0T7 212 aa16.69■□□□□ 0.26
UBAP1-201ENST00000297661 GOLGA8IPA6NC78 632 aa16.68■□□□□ 0.26
UBAP1-201ENST00000297661 GOLGA8JA6NMD2 632 aa16.68■□□□□ 0.26
UBAP1-201ENST00000297661 CCDC169A6NNP5 214 aa16.68■□□□□ 0.26
UBAP1-201ENST00000297661 PAPOLAP51003 745 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms