RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 LRRC43Q8N309 656 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 EHD2Q9NZN4 543 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 SATB1Q01826 763 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 TROAPQ12815 778 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 SNAPC2Q13487 334 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 CLEC10AQ8IUN9 316 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 RNF168Q8IYW5 571 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 ATP11CQ8NB49 1132 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 YIPF3Q9GZM5 350 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 BAG5Q9UL15 447 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 ANKS1AQ92625 1134 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 XPO6Q96QU8 1125 aaKnown RBP17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 DNAJC7Q99615 494 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 MTRQ99707 1265 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 SCP2P22307 547 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 CASP2P42575 452 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 STAT4Q14765 748 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 AGBL2Q5U5Z8 902 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 BZW1Q7L1Q6 419 aaKnown RBP17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 POLIQ9UNA4 740 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 ARL2BPQ9Y2Y0 163 aa17.03■□□□□ 0.32
ARHGEF28-201ENST00000296794 MYBP10242 640 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 CEP55Q53EZ4 464 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 C1orf146Q5VVC0 180 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 WDR93Q6P2C0 686 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 ATL2Q8NHH9 583 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 SKA2Q8WVK7 121 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 NUDCD1Q96RS6 583 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 CENPKQ9BS16 269 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 SMYD3Q9H7B4 428 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 CCDC195A0A1B0GUA6 201 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 RASA1P20936 1047 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 GMPSP49915 693 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 EZH2Q15910 746 aaKnown RBP17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 ISCUQ9H1K1 167 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 KIF9Q9HAQ2 790 aa17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 GPBP1L1Q9HC44 474 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF28-201ENST00000296794 RAD23BP54727 409 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 TRIM72Q6ZMU5 477 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 SEC16BQ96JE7 1060 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 GOLPH3Q9H4A6 298 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 CACYBPQ9HB71 228 aaKnown RBP17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 CFAP69A5D8W1 941 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 EIF4E1BA6NMX2 242 aaKnown RBP17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 HUS1O60921 280 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 KRT7P08729 469 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 ARSEP51690 589 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 GPD1LQ8N335 351 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 GCOM2Q9BZD3 368 aaPredicted RBP17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 SLC24A3Q9HC58 644 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 PCDHA10Q9Y5I2 948 aa17.02■□□□□ 0.31
ARHGEF28-201ENST00000296794 PSMC1P62191 440 aaKnown RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 LONRF1Q17RB8 773 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 ARL13BQ3SXY8 428 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 DEFB132Q7Z7B7 95 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 CYFIP2Q96F07 1278 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 PARK7Q99497 189 aaKnown RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 L1RE1Q9UN81 338 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 CIITAP33076 1130 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 CELF4Q9BZC1 486 aaKnown RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 DBR1Q9UK59 544 aaKnown RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 ADGRB1O14514 1584 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 TXNP10599 105 aaKnown RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 CORO7P57737 925 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 JAMLQ86YT9 394 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 RHPN2Q8IUC4 686 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 BEST2Q8NFU1 509 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 FAM161BQ96MY7 647 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 SSTR3P32745 418 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 TRMT10CQ7L0Y3 403 aaKnown RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 DONSONQ9NYP3 566 aa17.01■□□□□ 0.31
ARHGEF28-201ENST00000296794 NOP14P78316 857 aaKnown RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 SLC30A5Q8TAD4 765 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 URGCPQ8TCY9 931 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 PRPF31Q8WWY3 499 aaKnown RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 DDX56Q9NY93 547 aaKnown RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 DUSP10Q9Y6W6 482 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 AGLP35573 1532 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 HUNKP57058 714 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 CDC42EP5Q6NZY7 148 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 SYN2Q92777 582 aaPredicted RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 TRABDQ9H4I3 376 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 HSPBP1Q9NZL4 362 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 NYAP2Q9P242 653 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
ARHGEF28-201ENST00000296794 LRRIQ3A6PVS8 624 aaPredicted RBP17■□□□□ 0.31
ARHGEF28-201ENST00000296794 PDHBP11177 359 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms