RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 NKX1-2Q9UD57 310 aaPredicted RBP13.38□□□□□ -0.27
CAGE1-201ENST00000296742 DAAM1Q9Y4D1 1078 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
CAGE1-201ENST00000296742 COL2A1P02458 1487 aaPredicted RBP13.37□□□□□ -0.27
CAGE1-201ENST00000296742 MYCLP12524 364 aaPredicted RBP13.37□□□□□ -0.27
CAGE1-201ENST00000296742 FERP16591 822 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 CNGA2Q16280 664 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 NSMFQ6X4W1 530 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 GBP7Q8N8V2 638 aaPredicted RBP13.37□□□□□ -0.27
CAGE1-201ENST00000296742 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 NAGPAQ9UK23 515 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
CAGE1-201ENST00000296742 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 PSME4Q14997 1843 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 AGTP01019 485 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 TGFB2P61812 414 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 RNASELQ05823 741 aaKnown RBP13.37□□□□□ -0.27
CAGE1-201ENST00000296742 TNIP1Q15025 636 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 KNOP1Q1ED39 458 aaKnown RBP13.37□□□□□ -0.27
CAGE1-201ENST00000296742 CWF19L1Q69YN2 538 aaKnown RBP13.37□□□□□ -0.27
CAGE1-201ENST00000296742 ANO7Q6IWH7 933 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 FAM160B2Q86V87 743 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 ANKRD42Q8N9B4 389 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 FBF1Q8TES7 1133 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 TEKT4Q8WW24 435 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 ERP44Q9BS26 406 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 ZCWPW1Q9H0M4 648 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 ETNK1Q9HBU6 452 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 KCNH7Q9NS40 1196 aa13.37□□□□□ -0.27
CAGE1-201ENST00000296742 PEX10O60683 326 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 AKAP3O75969 853 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 EYA4O95677 639 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 ZBTB48P10074 688 aaPredicted RBP13.36□□□□□ -0.27
CAGE1-201ENST00000296742 KRT13P13646 458 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 VCAM1P19320 739 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 NLGN2Q8NFZ4 835 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 TAAR1Q96RJ0 339 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 LXNQ9BS40 222 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 ZDHHC18Q9NUE0 388 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 RIPK3Q9Y572 518 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 CETN3O15182 167 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 ICAM1P05362 532 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 SLC9A1P19634 815 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 RAD23BP54727 409 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 POU5F1Q01860 360 aaKnown RBP13.36□□□□□ -0.27
CAGE1-201ENST00000296742 ZNF211Q13398 564 aaPredicted RBP13.36□□□□□ -0.27
CAGE1-201ENST00000296742 LMNTD2Q8IXW0 634 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 GDAP1Q8TB36 358 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 CLEC4DQ8WXI8 215 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 RMDN2Q96LZ7 410 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 CCDC134Q9H6E4 229 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
CAGE1-201ENST00000296742 ERVK-5Q9HDB9 667 aa13.36□□□□□ -0.27
CAGE1-201ENST00000296742 H0Y3Z8 333 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 RASGRF2O14827 1237 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 FAM13AO94988 1023 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 OAS1P00973 400 aaKnown RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 RPS6P62753 249 aaKnown RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 ARHGAP27Q6ZUM4 889 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 TAOK1Q7L7X3 1001 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 NT5DC3Q86UY8 548 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 PITPNM2Q9BZ72 1349 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 CREB1P16220 341 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 GBP1P32455 592 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 MRPS9P82933 396 aaKnown RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 DUPD1Q68J44 220 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 CCDC25Q86WR0 208 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 MFN1Q8IWA4 741 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 TEX9Q8N6V9 391 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 ATG4CQ96DT6 458 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 WRNIP1Q96S55 665 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 ZNF541Q9H0D2 1346 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 KCNK9Q9NPC2 374 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 SUCLA2Q9P2R7 463 aaPredicted RBP13.35□□□□□ -0.27
CAGE1-201ENST00000296742 AMFRQ9UKV5 643 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 ARL2BPQ9Y2Y0 163 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 RPTORQ8N122 1335 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 BTNL10A8MVZ5 291 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 H2AFZP0C0S5 128 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 HMGCS2P54868 508 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 PTENP60484 403 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 SP4Q02446 784 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 C10orf76Q5T2E6 689 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 C1orf186Q6ZWK4 172 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 H2AFVQ71UI9 128 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 ASRGL1Q7L266 308 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
CAGE1-201ENST00000296742 SYT15Q9BQS2 421 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms