RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MUTP22033 750 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 STK4Q13043 487 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 SGSM1Q2NKQ1 1148 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 CHP1Q99653 195 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 JMJD4Q9H9V9 463 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 SMIM24O75264 130 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 RPSAP08865 295 aaKnown RBP13.55□□□□□ -0.24
PTCD1-201ENST00000292478 KRT80Q6KB66 452 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 GSPT2Q8IYD1 628 aaKnown RBP13.55□□□□□ -0.24
PTCD1-201ENST00000292478 ZBED8Q8IZ13 594 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 SLC35G2Q8TBE7 412 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 LRRC37BQ96QE4 947 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 POLD4Q9HCU8 107 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 ZNF70Q9UC06 446 aaPredicted RBP13.55□□□□□ -0.24
PTCD1-201ENST00000292478 PSMD3O43242 534 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 SLC4A1P02730 911 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 HSPA9P38646 679 aaKnown RBP13.55□□□□□ -0.24
PTCD1-201ENST00000292478 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 PPM1NQ8N819 430 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 TGS1Q96RS0 853 aaKnown RBP13.55□□□□□ -0.24
PTCD1-201ENST00000292478 MXRA8Q9BRK3 442 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 FAM129AQ9BZQ8 928 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 SMARCAD1Q9H4L7 1026 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 ANKEF1Q9NU02 776 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 ITSN1Q15811 1721 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 ESYT3A0FGR9 886 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 MAGEB2O15479 319 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 HNRNPCL1O60812 293 aaKnown RBP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 GALCP54803 685 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 RBP5P82980 135 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 YWHAHQ04917 246 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 C18orf8Q96DM3 657 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 SENP7Q9BQF6 1050 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 TTC7AQ9ULT0 858 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 CHUKO15111 745 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 CFLARO15519 480 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 IL18RAPO95256 599 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 CYP2C19P33261 490 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 ARFIP2P53365 341 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 MTMR2Q13614 643 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 MOXD1Q6UVY6 613 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 SEPT1Q8WYJ6 367 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 SMG5Q9UPR3 1016 aaKnown RBP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 MYO1CO00159 1063 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 FXR1P51114 621 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 CDH6P55285 790 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 RNF149Q8NC42 400 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 ZNF280CQ8ND82 737 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 NRBF2Q96F24 287 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 LRRC1Q9BTT6 524 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 VPS11Q9H270 941 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 SUCLA2Q9P2R7 463 aaPredicted RBP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 STOML1Q9UBI4 398 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 CREB3O43889 395 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 CCDC22O60826 627 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 HMGCS2P54868 508 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 VSNL1P62760 191 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 CCDC138Q96M89 665 aa13.54□□□□□ -0.24
PTCD1-201ENST00000292478 ABT1Q9ULW3 272 aaKnown RBP13.54□□□□□ -0.24
PTCD1-201ENST00000292478 SNX2O60749 519 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 ARSEP51690 589 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 SNRNP35Q16560 246 aaKnown RBP13.53□□□□□ -0.24
PTCD1-201ENST00000292478 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 AMACRQ9UHK6 382 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 NCOA3Q9Y6Q9 1424 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 HOXD10P28358 340 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 GYS2P54840 703 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 PHEXP78562 749 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 ST13P4Q8IZP2 240 aaPredicted RBP13.53□□□□□ -0.24
PTCD1-201ENST00000292478 C1orf54Q8WWF1 131 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 DHX35Q9H5Z1 703 aaKnown RBP13.53□□□□□ -0.24
PTCD1-201ENST00000292478 C17orf75Q9HAS0 396 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 TMEM8AQ9HCN3 771 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 CFAP69A5D8W1 941 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 GOLGA8MH3BSY2 632 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 CDK17Q00537 523 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 NCAPHQ15003 741 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 HIF1AQ16665 826 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 FAM47EQ6ZV65 393 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 KIRREL3Q8IZU9 778 aa13.53□□□□□ -0.24
PTCD1-201ENST00000292478 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
PTCD1-201ENST00000292478 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms