RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 MUTP22033 750 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 RESTQ13127 1097 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 ADAM15Q13444 863 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 SMAD4Q13485 552 aaKnown RBP10.77□□□□□ -0.69
CCDC58-201ENST00000291458 KARSQ15046 597 aaKnown RBP10.77□□□□□ -0.69
CCDC58-201ENST00000291458 DUSP6Q16828 381 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 FOXD4L6Q3SYB3 417 aaPredicted RBP10.77□□□□□ -0.69
CCDC58-201ENST00000291458 GLRA4Q5JXX5 417 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 RINT1Q6NUQ1 792 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 FOXD4L3Q6VB84 417 aaPredicted RBP10.77□□□□□ -0.69
CCDC58-201ENST00000291458 MRPL10Q7Z7H8 261 aaKnown RBP10.77□□□□□ -0.69
CCDC58-201ENST00000291458 ZBTB33Q86T24 672 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 GPBP1Q86WP2 473 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 KIFAP3Q92845 792 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 B3GALT6Q96L58 329 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 ADPGKQ9BRR6 497 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 VN1R3Q9BXE9 311 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 NFKBIZQ9BYH8 718 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 CCDC113Q9H0I3 377 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 ZBP1Q9H171 429 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 ZHX3Q9H4I2 956 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 KMT5AQ9NQR1 393 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 MIOSQ9NXC5 875 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 SNTG2Q9NY99 539 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 LZTS1Q9Y250 596 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 FAN1Q9Y2M0 1017 aa10.77□□□□□ -0.69
CCDC58-201ENST00000291458 FAM86C2PA6NEL3 165 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 C2orf71A6NGG8 1288 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 CASTOR2A6NHX0 329 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 NRP1O14786 923 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 NCK2O43639 380 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 CXCL14O95715 111 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 WEE2P0C1S8 567 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 PLCG1P19174 1290 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 NPTX2P47972 431 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 OSTNP61366 133 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 POU5F1BQ06416 359 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 MAPK7Q13164 816 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 PCBP1Q15365 356 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC58-201ENST00000291458 ZNF568Q3ZCX4 644 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 TMEM119Q4V9L6 283 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 ATF7IP2Q5U623 682 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 GLYCTKQ8IVS8 523 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 DAW1Q8N136 415 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 GJD3Q8N144 294 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 CNNM3Q8NE01 707 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 LRRC15Q8TF66 581 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 CALML4Q96GE6 196 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 PRIMPOLQ96LW4 560 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 DRC1Q96MC2 740 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 CXCL16Q9H2A7 254 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 FZD8Q9H461 694 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 NGRNQ9NPE2 291 aaKnown RBP10.76□□□□□ -0.69
CCDC58-201ENST00000291458 MARCH5Q9NX47 278 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 ANKFY1Q9P2R3 1169 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 FAM50BQ9Y247 325 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 USP15Q9Y4E8 981 aaPredicted RBP10.76□□□□□ -0.69
CCDC58-201ENST00000291458 PHLPP2Q6ZVD8 1323 aa10.76□□□□□ -0.69
CCDC58-201ENST00000291458 CITO14578 2027 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 TTC28Q96AY4 2481 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 A0A1B0GUA9 196 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 SMAPO00193 183 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 CLASP2O75122 1294 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 KRT18P05783 430 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 UBA7P41226 1012 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 MATR3P43243 847 aaKnown RBP eCLIP10.75□□□□□ -0.699e-7■■□□□ 13.9
CCDC58-201ENST00000291458 GRIK3Q13003 919 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 MCM6Q14566 821 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 BMS1Q14692 1282 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 FAM187BQ17R55 369 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 PUS10Q3MIT2 529 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 RARS2Q5T160 578 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 NT5DC1Q5TFE4 455 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 ARL6IP4Q66PJ3 421 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 PDE12Q6L8Q7 609 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 KANK3Q6NY19 840 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 C1orf186Q6ZWK4 172 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 DDX53Q86TM3 631 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 COLGALT2Q8IYK4 626 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 C12orf76Q8N812 135 aaPredicted RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 CEP120Q8N960 986 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 MSLNLQ96KJ4 702 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 CLIC6Q96NY7 704 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 CDCA3Q99618 268 aaPredicted RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 TARS2Q9BW92 718 aaKnown RBP10.75□□□□□ -0.69
CCDC58-201ENST00000291458 NT5C3AQ9H0P0 336 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 EPHX3Q9H6B9 360 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 UBN1Q9NPG3 1134 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 KANSL3Q9P2N6 904 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 MTMR6Q9Y217 621 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 GIT1Q9Y2X7 761 aa10.75□□□□□ -0.69
CCDC58-201ENST00000291458 K7ENM7 598 aa10.74□□□□□ -0.69
CCDC58-201ENST00000291458 K7ERI5 159 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms