RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 RECQL4O94761 1208 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 PRPF6O94906 941 aaKnown RBP29.41■■■□□ 2.3
SSU72-201ENST00000291386 CTNNB1P35222 781 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 KYAT1Q16773 422 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 GLIS3Q8NEA6 775 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 ZFP42Q96MM3 310 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 EXOC1Q9NV70 894 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 MIOSQ9NXC5 875 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 MTUS1Q9ULD2 1270 aa29.41■■■□□ 2.3
SSU72-201ENST00000291386 KCNB1Q14721 858 aa29.4■■■□□ 2.3
SSU72-201ENST00000291386 BMT2Q1RMZ1 405 aa29.4■■■□□ 2.3
SSU72-201ENST00000291386 SPOUT1Q5T280 376 aaKnown RBP29.4■■■□□ 2.3
SSU72-201ENST00000291386 COLGALT1Q8NBJ5 622 aa29.4■■■□□ 2.3
SSU72-201ENST00000291386 GBP4Q96PP9 640 aa29.4■■■□□ 2.3
SSU72-201ENST00000291386 NRDE2Q9H7Z3 1164 aa29.4■■■□□ 2.3
SSU72-201ENST00000291386 GDAQ9Y2T3 454 aa29.4■■■□□ 2.3
SSU72-201ENST00000291386 PCDHB12Q9Y5F1 795 aa29.4■■■□□ 2.3
SSU72-201ENST00000291386 COL4A4P53420 1690 aaPredicted RBP29.4■■■□□ 2.3
SSU72-201ENST00000291386 CITO14578 2027 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 FAM189A1O60320 539 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 LPXNO60711 386 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 RHOBTB3O94955 611 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 POU3F3P20264 500 aaPredicted RBP29.39■■■□□ 2.3
SSU72-201ENST00000291386 XKR4Q5GH76 650 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 ALKAL1Q6UXT8 129 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 THNSL1Q8IYQ7 743 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 CCDC47Q96A33 483 aaKnown RBP29.39■■■□□ 2.3
SSU72-201ENST00000291386 ACAP3Q96P50 834 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 C11orf84Q9BUA3 381 aaPredicted RBP29.39■■■□□ 2.3
SSU72-201ENST00000291386 SLC39A2Q9NP94 309 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 TOPORSQ9NS56 1045 aaPredicted RBP29.39■■■□□ 2.3
SSU72-201ENST00000291386 KLK14Q9P0G3 267 aa29.39■■■□□ 2.3
SSU72-201ENST00000291386 CHD7Q9P2D1 2997 aa29.39■■■□□ 2.29
SSU72-201ENST00000291386 KINO60870 393 aaKnown RBP29.38■■■□□ 2.29
SSU72-201ENST00000291386 POMCP01189 267 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 MATR3P43243 847 aaKnown RBP eCLIP29.38■■■□□ 2.29
SSU72-201ENST00000291386 SCNN1GP51170 649 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 YARSP54577 528 aaKnown RBP29.38■■■□□ 2.29
SSU72-201ENST00000291386 RNASELQ05823 741 aaKnown RBP29.38■■■□□ 2.29
SSU72-201ENST00000291386 GRIK3Q13003 919 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 STK4Q13043 487 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 KCNT2Q6UVM3 1135 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 ZNF280BQ86YH2 543 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 SCFD1Q8WVM8 642 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 RPS6KC1Q96S38 1066 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 TMEM175Q9BSA9 504 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 HOOK1Q9UJC3 728 aaKnown RBP29.38■■■□□ 2.29
SSU72-201ENST00000291386 TRIP11Q15643 1979 aa29.38■■■□□ 2.29
SSU72-201ENST00000291386 OGTO15294 1046 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 DDHD2O94830 711 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 HARSP12081 509 aaKnown RBP29.37■■■□□ 2.29
SSU72-201ENST00000291386 ADSSP30520 456 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 HOXD13P35453 343 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 DSC1Q08554 894 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 GPM6BQ13491 265 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 SYCP3Q8IZU3 236 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 SPATA20Q8TB22 786 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 ZNF558Q96NG5 402 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 GAS2L1Q99501 681 aaPredicted RBP29.37■■■□□ 2.29
SSU72-201ENST00000291386 MSTO1Q9BUK6 570 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 IKZF4Q9H2S9 585 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 LMCD1Q9NZU5 365 aa29.37■■■□□ 2.29
SSU72-201ENST00000291386 TISP43B9A030 160 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 RFXAPO00287 272 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 PTGESO14684 152 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 CLTAP09496 248 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 GARTP22102 1010 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 PPM1AP35813 382 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 BCAR1P56945 870 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 OSTNP61366 133 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 POU5F1Q01860 360 aaKnown RBP29.36■■■□□ 2.29
SSU72-201ENST00000291386 PNOCQ13519 176 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 COLGALT2Q8IYK4 626 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 KLHL23Q8NBE8 558 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 KIAA0895Q8NCT3 520 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 SNX27Q96L92 541 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 FAM193BQ96PV7 902 aaPredicted RBP29.36■■■□□ 2.29
SSU72-201ENST00000291386 PLAGL2Q9UPG8 496 aa29.36■■■□□ 2.29
SSU72-201ENST00000291386 GALTP07902 379 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 ALDH7A1P49419 539 aaKnown RBP29.35■■■□□ 2.29
SSU72-201ENST00000291386 SNRPFP62306 86 aaKnown RBP29.35■■■□□ 2.29
SSU72-201ENST00000291386 PLCB3Q01970 1234 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 ADGRE1Q14246 886 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 SLC39A11Q8N1S5 342 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 GDPD5Q8WTR4 605 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 MYLIPQ8WY64 445 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 GSDMAQ96QA5 445 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 GBP3Q9H0R5 595 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 CXCL16Q9H2A7 254 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 PLEKHA5Q9HAU0 1116 aa29.35■■■□□ 2.29
SSU72-201ENST00000291386 CPSF3Q9UKF6 684 aaKnown RBP29.35■■■□□ 2.29
SSU72-201ENST00000291386 AGO2Q9UKV8 859 aaKnown RBP29.35■■■□□ 2.29
SSU72-201ENST00000291386 MEFVO15553 781 aaPredicted RBP29.34■■■□□ 2.29
SSU72-201ENST00000291386 B4GALT3O60512 393 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 ZC3H11AO75152 810 aaKnown RBP eCLIP29.34■■■□□ 2.29
SSU72-201ENST00000291386 ITGB1P05556 798 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 THP07101 528 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 ADRB2P07550 413 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 NAB2Q15742 525 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 SLC10A6Q3KNW5 377 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms