RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CRELD2Q6UXH1 353 aaPredicted RBP20.78■□□□□ 0.92
BRAF-201ENST00000288602 FBXO16Q8IX29 292 aaPredicted RBP20.78■□□□□ 0.92
BRAF-201ENST00000288602 COPS5Q92905 334 aa20.78■□□□□ 0.92
BRAF-201ENST00000288602 MAF1Q9H063 256 aa20.78■□□□□ 0.92
BRAF-201ENST00000288602 ISCUQ9H1K1 167 aa20.78■□□□□ 0.92
BRAF-201ENST00000288602 TMEM59LQ9UK28 342 aa20.78■□□□□ 0.92
BRAF-201ENST00000288602 MCM3APO60318 1980 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 NAMPTP43490 491 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 CAPSQ13938 189 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 DCAF12L1Q5VU92 463 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 SPOPLQ6IQ16 392 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 ACTRT1Q8TDG2 376 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 PSPC1Q8WXF1 523 aaKnown RBP20.77■□□□□ 0.92
BRAF-201ENST00000288602 GLG1Q92896 1179 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 ZNF668Q96K58 619 aaPredicted RBP20.77■□□□□ 0.92
BRAF-201ENST00000288602 FNBP1Q96RU3 617 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 NFU1Q9UMS0 254 aa20.77■□□□□ 0.92
BRAF-201ENST00000288602 CXCL11O14625 94 aa20.77■□□□□ 0.91
BRAF-201ENST00000288602 EPHX2P34913 555 aa20.77■□□□□ 0.91
BRAF-201ENST00000288602 TARBP2Q15633 366 aaKnown RBP20.77■□□□□ 0.91
BRAF-201ENST00000288602 NAA35Q5VZE5 725 aa20.77■□□□□ 0.91
BRAF-201ENST00000288602 SCARA3Q6AZY7 606 aa20.77■□□□□ 0.91
BRAF-201ENST00000288602 ADAT2Q7Z6V5 191 aaKnown RBP20.77■□□□□ 0.91
BRAF-201ENST00000288602 SEPT1Q8WYJ6 367 aa20.77■□□□□ 0.91
BRAF-201ENST00000288602 ZBTB10Q96DT7 871 aa20.77■□□□□ 0.91
BRAF-201ENST00000288602 DDX47Q9H0S4 455 aaKnown RBP20.77■□□□□ 0.91
BRAF-201ENST00000288602 NRBP2Q9NSY0 501 aa20.77■□□□□ 0.91
BRAF-201ENST00000288602 ZC3H4Q9UPT8 1303 aaKnown RBP20.77■□□□□ 0.91
BRAF-201ENST00000288602 ZNF211Q13398 564 aaPredicted RBP20.76■□□□□ 0.91
BRAF-201ENST00000288602 GLE1Q53GS7 698 aaKnown RBP20.76■□□□□ 0.91
BRAF-201ENST00000288602 METTL7BQ6UX53 244 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 USP37Q86T82 979 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 LRRC71Q8N4P6 559 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 PRPF31Q8WWY3 499 aaKnown RBP20.76■□□□□ 0.91
BRAF-201ENST00000288602 BTBD6Q96KE9 485 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.76■□□□□ 0.91
BRAF-201ENST00000288602 H0YCG3 227 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 PGRMC1O00264 195 aaKnown RBP20.76■□□□□ 0.91
BRAF-201ENST00000288602 CES2O00748 559 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 DDX3YO15523 660 aaKnown RBP20.76■□□□□ 0.91
BRAF-201ENST00000288602 RTN2O75298 545 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 SYF2O95926 243 aaKnown RBP20.76■□□□□ 0.91
BRAF-201ENST00000288602 CYP2C8P10632 490 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 BIRC3Q13489 604 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 TDRD10Q5VZ19 366 aaKnown RBP20.76■□□□□ 0.91
BRAF-201ENST00000288602 SCFD2Q8WU76 684 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 VTI1AQ96AJ9 217 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 KCNH4Q9UQ05 1017 aa20.76■□□□□ 0.91
BRAF-201ENST00000288602 KRIT1O00522 736 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 FAM153BP0C7A2 387 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 GTF2H1P32780 548 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 GJA5P36382 358 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 GGCXP38435 758 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 GPC5P78333 572 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 FAM153CQ494X1 144 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 HSP90B2PQ58FF3 399 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 FAM160B1Q5W0V3 765 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 AADACL2Q6P093 401 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 CPNE8Q86YQ8 564 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 CASKIN2Q8WXE0 1202 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 MMP19Q99542 508 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 MSTO1Q9BUK6 570 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 AZI2Q9H6S1 392 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 VIPAS39Q9H9C1 493 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 GDF3Q9NR23 364 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 FAM153AQ9UHL3 310 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 ADAM21Q9UKJ8 722 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 CLSTN1O94985 981 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 SRGAP2CP0DJJ0 459 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 TGFB3P10600 412 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 PDE6CP51160 858 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 TNNC1P63316 161 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 PPIL2Q13356 520 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 KCTD2Q14681 263 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 DPY19L2Q6NUT2 758 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 C15orf39Q6ZRI6 1047 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 IFT20Q8IY31 132 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 MSL3Q8N5Y2 521 aaKnown RBP20.75■□□□□ 0.91
BRAF-201ENST00000288602 TRAPPC12Q8WVT3 735 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 PDGFCQ9NRA1 345 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 RBAKQ9NYW8 714 aaPredicted RBP20.75■□□□□ 0.91
BRAF-201ENST00000288602 NR2E1Q9Y466 385 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 ALG6Q9Y672 507 aa20.75■□□□□ 0.91
BRAF-201ENST00000288602 ZNFX1Q9P2E3 1918 aaKnown RBP20.74■□□□□ 0.91
BRAF-201ENST00000288602 NOP56O00567 594 aaKnown RBP20.74■□□□□ 0.91
BRAF-201ENST00000288602 FGGP02679 453 aa20.74■□□□□ 0.91
BRAF-201ENST00000288602 GPAT2Q6NUI2 795 aa20.74■□□□□ 0.91
BRAF-201ENST00000288602 TSEN2Q8NCE0 465 aaKnown RBP20.74■□□□□ 0.91
BRAF-201ENST00000288602 GPR20Q99678 358 aa20.74■□□□□ 0.91
BRAF-201ENST00000288602 STYXL1Q9Y6J8 313 aa20.74■□□□□ 0.91
BRAF-201ENST00000288602 AGPSO00116 658 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 SLC25A27O95847 323 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 HLA-DRAP01903 254 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 GJB1P08034 283 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 COPB2P35606 906 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 EPHB4P54760 987 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 MESDQ14696 234 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 PSMD6Q15008 389 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 ZBTB33Q86T24 672 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 RASGEF1CQ8N431 466 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms