RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HRO43593 1189 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 LILRB3O75022 631 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 PRKCBP05771 671 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 ADRB2P07550 413 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 IRS1P35568 1242 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 LTBRP36941 435 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 ERVFC1P60507 584 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 PRPF4BQ13523 1007 aaKnown RBP10.08□□□□□ -0.8
HMGN1-201ENST00000288344 STK38Q15208 465 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 ZRSR1Q15695 479 aaKnown RBP10.08□□□□□ -0.8
HMGN1-201ENST00000288344 NOMO2Q5JPE7 1267 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 SLC39A4Q6P5W5 647 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 CD300LGQ6UXG3 332 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 ZNF720Q7Z2F6 126 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 GPBP1Q86WP2 473 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 COLGALT2Q8IYK4 626 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 KCNG4Q8TDN1 519 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 LEO1Q8WVC0 666 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-201ENST00000288344 PGBD4Q96DM1 585 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 ZBTB45Q96K62 511 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-201ENST00000288344 GAD1Q99259 594 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 C11orf84Q9BUA3 381 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-201ENST00000288344 PANK2Q9BZ23 570 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 NXF3Q9H4D5 531 aaKnown RBP10.08□□□□□ -0.8
HMGN1-201ENST00000288344 ALG13Q9NP73 1137 aaKnown RBP10.08□□□□□ -0.8
HMGN1-201ENST00000288344 DNAJB4Q9UDY4 337 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 KCNG1Q9UIX4 513 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 LZTS1Q9Y250 596 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 GIT1Q9Y2X7 761 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 STYXL1Q9Y6J8 313 aa10.08□□□□□ -0.8
HMGN1-201ENST00000288344 FGF18O76093 207 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ERLIN2O94905 339 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 IGFBP4P22692 258 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CTNNB1P35222 781 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 BCAR1P56945 870 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 UBE3AQ05086 875 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 RAD51AP2Q09MP3 1159 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 RRAGBQ5VZM2 374 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ADALQ6DHV7 355 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ZPBP2Q6X784 338 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CCDC73Q6ZRK6 1079 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 HAUS6Q7Z4H7 955 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ZBTB8OSQ8IWT0 167 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 LRRC43Q8N309 656 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 DEPTORQ8TB45 409 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 IFT74Q96LB3 600 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ZFP42Q96MM3 310 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 RSAD1Q9HA92 442 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 UBN1Q9NPG3 1134 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 KMT5AQ9NQR1 393 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CFAP45Q9UL16 551 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 PHLPP2Q6ZVD8 1323 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 N4BP3O15049 544 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 NPTXRO95502 500 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ITGA4P13612 1032 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 LAG3P18627 525 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 SCP2P22307 547 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CMA1P23946 247 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 AKAP5P24588 427 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 IGFBP6P24592 240 aaPredicted RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 HOXD13P35453 343 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 PBX3P40426 434 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 SLC11A1P49279 550 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 MCL1Q07820 350 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 HYAL1Q12794 435 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 DMP1Q13316 513 aaPredicted RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ZBTB6Q15916 424 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 FOXD4L6Q3SYB3 417 aaPredicted RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 ATF7IP2Q5U623 682 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 GLB1LQ6UWU2 654 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 FOXD4L3Q6VB84 417 aaPredicted RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CEP120Q8N960 986 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 POF1BQ8WVV4 589 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 MRPS27Q92552 414 aaKnown RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 IGSF21Q96ID5 467 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 C7orf25Q9BPX7 421 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 TMEM175Q9BSA9 504 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 MRPL9Q9BYD2 267 aaKnown RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 FGFBP2Q9BYJ0 223 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CDT1Q9H211 546 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 PARVGQ9HBI0 331 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 MARCH5Q9NX47 278 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 SNTG2Q9NY99 539 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 LARSQ9P2J5 1176 aaKnown RBP10.07□□□□□ -0.8
HMGN1-201ENST00000288344 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 TBX20Q9UMR3 447 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 IRAK3Q9Y616 596 aa10.07□□□□□ -0.8
HMGN1-201ENST00000288344 TDRD15B5MCY1 1934 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 A0A0B4J269 797 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 NT5C1B-RDH14C9J2C7 533 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 NRP1O14786 923 aa10.06□□□□□ -0.8
HMGN1-201ENST00000288344 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
HMGN1-201ENST00000288344 TRAK2O60296 914 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms