RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 GGA2Q9UJY4 613 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 COG5Q9UP83 839 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 ATXN2Q99700 1313 aaKnown RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 GOLGA8RI6L899 631 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 DNAJC8O75937 253 aaPredicted RBP14.3□□□□□ -0.12
SCAF4-201ENST00000286835 DPEP1P16444 411 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 CD58P19256 250 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 WDR44Q5JSH3 913 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 PHLDB3Q6NSJ2 640 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 SLC47A2Q86VL8 602 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 ARHGEF19Q8IW93 802 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 GRK7Q8WTQ7 553 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 PI4K2AQ9BTU6 479 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.3□□□□□ -0.127e-6■■■□□ 16.5
SCAF4-201ENST00000286835 STK24Q9Y6E0 443 aa14.3□□□□□ -0.12
SCAF4-201ENST00000286835 ANKRD63C9JTQ0 380 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 RTN2O75298 545 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 XRCC4Q13426 336 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 ITIH4Q14624 930 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 PRUNE1Q86TP1 453 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 ZFPM1Q8IX07 1006 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 XXYLT1Q8NBI6 393 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 PGM2Q96G03 612 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 HAO1Q9UJM8 370 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 AGTPBP1Q9UPW5 1226 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 A0A0G2JND7 137 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 ASAP2O43150 1006 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 SNX3O60493 162 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 NDUFB10O96000 172 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 GHRP10912 638 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 CNGA2Q16280 664 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 DCAF12L1Q5VU92 463 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 DCUN1D2Q6PH85 259 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 EXOC3L1Q86VI1 746 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 ERICH1Q86X53 443 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 C11orf70Q9BRQ4 267 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 TXLNGQ9NUQ3 528 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 SPATS2LQ9NUQ6 558 aaKnown RBP14.29□□□□□ -0.12
SCAF4-201ENST00000286835 TGFB1I1O43294 461 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 SPATA31C1P0DKV0 1188 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 NPEPPSP55786 919 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 CRYMQ14894 314 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 IZUMO3Q5VZ72 239 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 SNF8Q96H20 258 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 ACCSQ96QU6 501 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 NUDCD1Q96RS6 583 aa14.29□□□□□ -0.12
SCAF4-201ENST00000286835 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCAF4-201ENST00000286835 CICQ96RK0 1608 aaPredicted RBP14.28□□□□□ -0.12
SCAF4-201ENST00000286835 DDX3YO15523 660 aaKnown RBP14.28□□□□□ -0.12
SCAF4-201ENST00000286835 PPP1R21Q6ZMI0 780 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 EIF1ADQ8N9N8 165 aaKnown RBP14.28□□□□□ -0.12
SCAF4-201ENST00000286835 DHX38Q92620 1227 aaKnown RBP14.28□□□□□ -0.12
SCAF4-201ENST00000286835 FAM84AQ96KN4 292 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 TCHPQ9BT92 498 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 KIF9Q9HAQ2 790 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 AGAP1Q9UPQ3 857 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 C15orf41Q9Y2V0 281 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 CSADQ9Y600 493 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 PHRF1Q9P1Y6 1649 aaKnown RBP14.28□□□□□ -0.12
SCAF4-201ENST00000286835 KRT16P08779 473 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 PLS3P13797 630 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 MMP13P45452 471 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 PRELPP51888 382 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 LIN9Q5TKA1 542 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 ANKRD20A3Q5VUR7 823 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 TTC27Q6P3X3 843 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 USP37Q86T82 979 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 TEX2Q8IWB9 1127 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 RASGEF1CQ8N431 466 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 KLF6Q99612 283 aaPredicted RBP14.28□□□□□ -0.12
SCAF4-201ENST00000286835 OSBPL1AQ9BXW6 950 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 ECM29Q5VYK3 1845 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 BCL9LQ86UU0 1499 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 POLRMTO00411 1230 aaKnown RBP14.28□□□□□ -0.12
SCAF4-201ENST00000286835 ANXA13P27216 316 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 RASA3Q14644 834 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 TMEM117Q9H0C3 514 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 C1orf112Q9NSG2 853 aa14.28□□□□□ -0.12
SCAF4-201ENST00000286835 SGK1O00141 431 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 HNRNPDLO14979 420 aaKnown RBP14.27□□□□□ -0.12
SCAF4-201ENST00000286835 ZBED4O75132 1171 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 PIAS1O75925 651 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 SHMT1P34896 483 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.12
SCAF4-201ENST00000286835 ZNF526Q8TF50 670 aaPredicted RBP14.27□□□□□ -0.12
SCAF4-201ENST00000286835 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 KCNMB3Q9NPA1 279 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 CHST7Q9NS84 486 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 TESPA1A2RU30 521 aaPredicted RBP14.27□□□□□ -0.12
SCAF4-201ENST00000286835 BTNL10A8MVZ5 291 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 CHKAP35790 457 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 STAT2P52630 851 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 SYCP2LQ5T4T6 812 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 DCAF15Q66K64 600 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 SIX2Q9NPC8 291 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 USP54Q70EL1 1684 aa14.27□□□□□ -0.12
SCAF4-201ENST00000286835 LRRD1A4D1F6 860 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms