RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 CXCL16Q9H2A7 254 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 TSPYL2Q9H2G4 693 aaPredicted RBP23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 SNTG2Q9NY99 539 aa23.74■■□□□ 1.39
PDLIM3-203ENST00000284771 A0A0U1RQF3 1178 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 ENPP3O14638 875 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 RFC2P35250 354 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 MCCD1P59942 119 aaPredicted RBP23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 ENOX2Q16206 610 aaKnown RBP23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 C16orf59Q7L2K0 433 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 TMEM199Q8N511 208 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 DPF3Q92784 378 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 FTHL17Q9BXU8 183 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 TRIM6Q9C030 488 aaPredicted RBP23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 KIAA1586Q9HCI6 787 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 PRKAG2Q9UGJ0 569 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 TRIP11Q15643 1979 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 ZNF233A6NK53 670 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 C9IYK1 514 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 MAPK13O15264 365 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 AP5Z1O43299 807 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 ATF7P17544 494 aaPredicted RBP23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 GRM5P41594 1212 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 DLG4P78352 724 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 GSE1Q14687 1217 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 FRMD5Q7Z6J6 570 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 APBB2Q92870 758 aa23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 ZMYND8Q9ULU4 1186 aaPredicted RBP23.73■■□□□ 1.39
PDLIM3-203ENST00000284771 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 LRRC10BA6NIK2 292 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 ZNF623O75123 536 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 GNA14O95837 355 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 CXCL8P10145 99 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 ACRP10323 421 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 EPB41P11171 864 aaKnown RBP23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 AKAP5P24588 427 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 CYP24A1Q07973 514 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 SLC10A6Q3KNW5 377 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 CCDC40Q4G0X9 1142 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 C1orf220Q5T0J3 134 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 TRIM59Q8IWR1 403 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 ARMCX3Q9UH62 379 aaPredicted RBP23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 LTBP2Q14767 1821 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 ANK1P16157 1881 aa23.72■■□□□ 1.39
PDLIM3-203ENST00000284771 CLTAP09496 248 aa23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 CDK11BP21127 795 aaKnown RBP23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 EEF1GP26641 437 aaKnown RBP23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 FAM189BP81408 668 aa23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 KRT31Q15323 416 aa23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 SLC24A5Q71RS6 500 aa23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 PARD3BQ8TEW8 1205 aa23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 POP1Q99575 1024 aaKnown RBP23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 PDE11AQ9HCR9 933 aa23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 RBAKQ9NYW8 714 aaPredicted RBP23.71■■□□□ 1.39
PDLIM3-203ENST00000284771 CITO14578 2027 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 BFSP1Q12934 665 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 MRPL10Q7Z7H8 261 aaKnown RBP23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 FAM114A1Q8IWE2 563 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 BRSK2Q8IWQ3 736 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 LPPQ93052 612 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 CCDC127Q96BQ5 260 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 FAM84AQ96KN4 292 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 ACAP3Q96P50 834 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 APOL6Q9BWW8 343 aa23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 LIMA1Q9UHB6 759 aaKnown RBP23.7■■□□□ 1.39
PDLIM3-203ENST00000284771 MICAL3Q7RTP6 2002 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 EPHB4P54760 987 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 MIIPQ5JXC2 388 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 CNKSR3Q6P9H4 555 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 ALKAL1Q6UXT8 129 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 AGMOQ6ZNB7 445 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 INTS8Q75QN2 995 aaKnown RBP23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 APBB1IPQ7Z5R6 666 aaPredicted RBP23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 ZNF598Q86UK7 904 aaKnown RBP23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 ECHDC2Q86YB7 292 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 CRIPAKQ8N1N5 446 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 SLC35C1Q96A29 364 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 TUBGCP2Q9BSJ2 902 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 METTL14Q9HCE5 456 aaKnown RBP23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 TTC3P53804 2025 aa23.7■■□□□ 1.38
PDLIM3-203ENST00000284771 TTC26A0AVF1 554 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 GOLGA6L3A6NEY3 463 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 RECQL4O94761 1208 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 VAMP7P51809 220 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 PSMD6Q15008 389 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 NAP1L5Q96NT1 182 aaPredicted RBP23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 CCDC94Q9BW85 323 aaPredicted RBP23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 RPF1Q9H9Y2 349 aaKnown RBP23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 IL23AQ9NPF7 189 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 RNF19AQ9NV58 838 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 TAB2Q9NYJ8 693 aa23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 MAGEC2Q9UBF1 373 aaPredicted RBP23.69■■□□□ 1.38
PDLIM3-203ENST00000284771 LACTBL1A8MY62 500 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 TRIM49P0CI25 452 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 TRIM49CP0CI26 452 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 MTIF2P46199 727 aaKnown RBP23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 RAB27AP51159 221 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 AFF1P51825 1210 aaKnown RBP23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 TPM4P67936 248 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 PTPRJQ12913 1337 aa23.68■■□□□ 1.38
PDLIM3-203ENST00000284771 KYAT1Q16773 422 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms