RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 NFX1Q12986 1120 aaKnown RBP20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 LPIN1Q14693 890 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 KYAT1Q16773 422 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 DCAF4L1Q3SXM0 396 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 SEZ6Q53EL9 994 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 THNSL1Q8IYQ7 743 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 TMC2Q8TDI7 906 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 CCDC51Q96ER9 411 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 OSBPL7Q9BZF2 842 aa20.56■□□□□ 0.88
PDLIM3-202ENST00000284770 KIAA0100Q14667 2235 aaKnown RBP20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 TNFSF9P41273 254 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 PAK2Q13177 524 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 FKBP15Q5T1M5 1219 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 LRRC8DQ7L1W4 858 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 USP37Q86T82 979 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 CEP120Q8N960 986 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 PLEKHO2Q8TD55 490 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 PARD3BQ8TEW8 1205 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 ERVK-5Q9HDB9 667 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 CHST12Q9NRB3 414 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 RBAKQ9NYW8 714 aaPredicted RBP20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 PADI3Q9ULW8 664 aa20.55■□□□□ 0.88
PDLIM3-202ENST00000284770 AFPP02771 609 aaKnown RBP20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 CD52P31358 61 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 DLG4P78352 724 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 POU5F1Q01860 360 aaKnown RBP20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 TBX2Q13207 712 aaPredicted RBP20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 PSMD6Q15008 389 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 SPECC1LQ69YQ0 1117 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 CCDC127Q96BQ5 260 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 ATP11BQ9Y2G3 1177 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 NPTXRO95502 500 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 CLTAP09496 248 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 TRIM49P0CI25 452 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 TRIM49CP0CI26 452 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 MBTPS1Q14703 1052 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 C1orf220Q5T0J3 134 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 BRSK2Q8IWQ3 736 aa20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 EIF2AQ9BY44 585 aaKnown RBP20.54■□□□□ 0.88
PDLIM3-202ENST00000284770 STAG3L1P0CL83 205 aa20.53■□□□□ 0.88
PDLIM3-202ENST00000284770 EN2P19622 333 aaPredicted RBP20.53■□□□□ 0.88
PDLIM3-202ENST00000284770 OSTNP61366 133 aa20.53■□□□□ 0.88
PDLIM3-202ENST00000284770 LRRC26Q2I0M4 334 aa20.53■□□□□ 0.88
PDLIM3-202ENST00000284770 UBXN11Q5T124 520 aa20.53■□□□□ 0.88
PDLIM3-202ENST00000284770 A0A1W2PQC6 194 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 LRRIQ3A6PVS8 624 aaPredicted RBP20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 GRM5P41594 1212 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 CLDN10P78369 228 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 TWF2Q6IBS0 349 aaKnown RBP20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 TMEM192Q8IY95 271 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 ERGIC2Q96RQ1 377 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 FNBP1Q96RU3 617 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 TRIM6Q9C030 488 aaPredicted RBP20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 KCNF1Q9H3M0 494 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 HIPK3Q9H422 1215 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 RPF1Q9H9Y2 349 aaKnown RBP20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 PDE11AQ9HCR9 933 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 ITIH6Q6UXX5 1313 aa20.52■□□□□ 0.88
PDLIM3-202ENST00000284770 RBAK-RBAKDNI3L0D1 243 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 STX10O60499 249 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 DLATP10515 647 aaKnown RBP20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 ZSCAN20P17040 1043 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 FMO5P49326 533 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 GSDMDP57764 484 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 ARID5BQ14865 1188 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 ENOX2Q16206 610 aaKnown RBP20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 UBE2Q1Q7Z7E8 422 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 ZNF830Q96NB3 372 aaPredicted RBP20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 POP1Q99575 1024 aaKnown RBP20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 GTF2H1P32780 548 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 WNT7BP56706 349 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 PPP3CAQ08209 521 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 SURF1Q15526 300 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 CACTINQ8WUQ7 758 aaKnown RBP20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 ACAP3Q96P50 834 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 TMX1Q9H3N1 280 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 TBX21Q9UL17 535 aa20.51■□□□□ 0.87
PDLIM3-202ENST00000284770 UMODL1Q5DID0 1318 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 TULP1O00294 542 aaPredicted RBP20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 CLTBP09497 229 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 CXCL8P10145 99 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 GCLMP48507 274 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 SYCP1Q15431 976 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 CBWD6Q4V339 395 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 CBWD3Q5JTY5 395 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 CBWD5Q5RIA9 395 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 CCDC94Q9BW85 323 aaPredicted RBP20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 TRAIPQ9BWF2 469 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 IFIH1Q9BYX4 1025 aaKnown RBP20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 MMRN2Q9H8L6 949 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 TMEM39AQ9NV64 488 aa20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.5■□□□□ 0.87
PDLIM3-202ENST00000284770 GTPBP10A4D1E9 387 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 PMM2O15305 246 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 NBNO60934 754 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 N4BP1O75113 896 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 IL18RAPO95256 599 aa20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 PARNO95453 639 aaKnown RBP20.49■□□□□ 0.87
PDLIM3-202ENST00000284770 DSC3Q14574 896 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms