RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ADGRE1Q14246 886 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 TIGD5Q53EQ6 642 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 KRBA2Q6ZNG9 492 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 LRRC55Q6ZSA7 311 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 UNC13DQ70J99 1090 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 ZNF720Q7Z2F6 126 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 ZNF280BQ86YH2 543 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 MAP4K3Q8IVH8 894 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 NELFCDQ8IXH7 590 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 TMEM87AQ8NBN3 555 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 POF1BQ8WVV4 589 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 RSPH1Q8WYR4 309 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 POMGNT1Q8WZA1 660 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 RABGGTAQ92696 567 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 CLP1Q92989 425 aaKnown RBP7.14□□□□□ -1.27
CD44-204ENST00000279452 HVCN1Q96D96 273 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 ACAP3Q96P50 834 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 C7orf25Q9BPX7 421 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 CWH43Q9H720 699 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 NRDE2Q9H7Z3 1164 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 SLC39A2Q9NP94 309 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 OLFML3Q9NRN5 406 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 SPG21Q9NZD8 308 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 PUF60Q9UHX1 559 aaKnown RBP7.14□□□□□ -1.27
CD44-204ENST00000279452 HOOK1Q9UJC3 728 aaKnown RBP7.14□□□□□ -1.27
CD44-204ENST00000279452 HPSEQ9Y251 543 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 FAN1Q9Y2M0 1017 aa7.14□□□□□ -1.27
CD44-204ENST00000279452 CEP290O15078 2479 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 FRMD3A2A2Y4 597 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 ANKRD63C9JTQ0 380 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 C5orf67F2Z3F1 127 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 PRPF40AO75400 957 aaKnown RBP7.13□□□□□ -1.27
CD44-204ENST00000279452 DDHD2O94830 711 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 CLSTN1O94985 981 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 RPN1P04843 607 aaKnown RBP7.13□□□□□ -1.27
CD44-204ENST00000279452 ALDH2P05091 517 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 ITGB1P05556 798 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 THP07101 528 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 ATXN8OSP0DMR3 200 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 CXCL8P10145 99 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 SLC11A1P49279 550 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 FAM160A1Q05DH4 1040 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 SPAG1Q07617 926 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 MCL1Q07820 350 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 KCNA1Q09470 495 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
CD44-204ENST00000279452 POSTNQ15063 836 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 KMT5BQ4FZB7 885 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 PLPP4Q5VZY2 271 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 SLFN12LQ6IEE8 588 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 KANK3Q6NY19 840 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 ARMCX5Q6P1M9 558 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 GLIS3Q8NEA6 775 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 HASPINQ8TF76 798 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 P2RX5Q93086 422 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 PPP2R3CQ969Q6 453 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 MRPL38Q96DV4 380 aaKnown RBP7.13□□□□□ -1.27
CD44-204ENST00000279452 SAAL1Q96ER3 474 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 GBP4Q96PP9 640 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 FIZ1Q96SL8 496 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 TCF25Q9BQ70 676 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 TMEM175Q9BSA9 504 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 FGFBP2Q9BYJ0 223 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 LMAN2LQ9H0V9 348 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 IKZF4Q9H2S9 585 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 PCIF1Q9H4Z3 704 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 NSUN3Q9H649 340 aaKnown RBP7.13□□□□□ -1.27
CD44-204ENST00000279452 IGFLR1Q9H665 355 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 TMEM206Q9H813 350 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 RPF1Q9H9Y2 349 aaKnown RBP7.13□□□□□ -1.27
CD44-204ENST00000279452 PTPRHQ9HD43 1115 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 TLR9Q9NR96 1032 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 CACNG4Q9UBN1 327 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 PLAGL2Q9UPG8 496 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 MTCH2Q9Y6C9 303 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 TRIOBPQ9H2D6 2365 aa7.13□□□□□ -1.27
CD44-204ENST00000279452 FAM237AA0A1B0GTK4 181 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.12□□□□□ -1.27
CD44-204ENST00000279452 PVALEFA0A1B0GWK0 134 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 GOLGA8IPA6NC78 632 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 SPDYE4A6NLX3 237 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 GOLGA8JA6NMD2 632 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 PTGESO14684 152 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 NRP1O14786 923 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 OGTO15294 1046 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 B4GALT3O60512 393 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 GADD45BO75293 160 aaPredicted RBP7.12□□□□□ -1.27
CD44-204ENST00000279452 TADA2AO75478 443 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 PIGRP01833 764 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 MYL1P05976 194 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 GALTP07902 379 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 CLTAP09496 248 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 LINC00271P0C7V0 271 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 PROZP22891 400 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 TNFSF9P41273 254 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 ACOT2P49753 483 aa7.12□□□□□ -1.27
CD44-204ENST00000279452 CYP2J2P51589 502 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms