RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IGKV6D-21A0A0A0MT36 114 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 P4HA2O15460 535 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 TGFB3P10600 412 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 GARTP22102 1010 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 SNRPFP62306 86 aaKnown RBP19.34■□□□□ 0.69
CAPN1-201ENST00000279247 SMC1AQ14683 1233 aaKnown RBP19.34■□□□□ 0.69
CAPN1-201ENST00000279247 KIF22Q14807 665 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 ARMCX2Q7L311 632 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 USP37Q86T82 979 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 LRRC57Q8N9N7 239 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 HELQQ8TDG4 1101 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 BTBD6Q96KE9 485 aa19.34■□□□□ 0.69
CAPN1-201ENST00000279247 INO80B-WBP1J3KQ70 363 aa19.33■□□□□ 0.69
CAPN1-201ENST00000279247 EXTL3O43909 919 aa19.33■□□□□ 0.69
CAPN1-201ENST00000279247 PRLRP16471 622 aa19.33■□□□□ 0.69
CAPN1-201ENST00000279247 FBXL18Q96ME1 805 aa19.33■□□□□ 0.69
CAPN1-201ENST00000279247 NIFKQ9BYG3 293 aaKnown RBP19.33■□□□□ 0.69
CAPN1-201ENST00000279247 INO80BQ9C086 356 aaPredicted RBP19.33■□□□□ 0.69
CAPN1-201ENST00000279247 COG5Q9UP83 839 aa19.33■□□□□ 0.69
CAPN1-201ENST00000279247 ZNFX1Q9P2E3 1918 aaKnown RBP19.33■□□□□ 0.68
CAPN1-201ENST00000279247 BTBD19C9JJ37 291 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 ADORA2AP29274 412 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 RTP1P59025 263 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 ZNF211Q13398 564 aaPredicted RBP19.33■□□□□ 0.68
CAPN1-201ENST00000279247 CASP8Q14790 479 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 IFT81Q8WYA0 676 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 CEP89Q96ST8 783 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 C1orf112Q9NSG2 853 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 TSKSQ9UJT2 592 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 CLDN3O15551 220 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.68
CAPN1-201ENST00000279247 THNSL1Q8IYQ7 743 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 GPRC5AQ8NFJ5 357 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 OR5B17Q8NGF7 314 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 RFFLQ8WZ73 363 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 CCDC102AQ96A19 550 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 SYT11Q9BT88 431 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 RNPEPQ9H4A4 650 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 L1RE1Q9UN81 338 aa19.33■□□□□ 0.68
CAPN1-201ENST00000279247 HLA-DRAP01903 254 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 TUBB4BP68371 445 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 LAMTOR4Q0VGL1 99 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 MKRN4PQ13434 485 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-201ENST00000279247 TARBP2Q15633 366 aaKnown RBP19.32■□□□□ 0.68
CAPN1-201ENST00000279247 TDRD10Q5VZ19 366 aaKnown RBP19.32■□□□□ 0.68
CAPN1-201ENST00000279247 CRELD2Q6UXH1 353 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-201ENST00000279247 HDXQ7Z353 690 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 TMC2Q8TDI7 906 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 PSPC1Q8WXF1 523 aaKnown RBP19.32■□□□□ 0.68
CAPN1-201ENST00000279247 NENFQ9UMX5 172 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 H0YCG3 227 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 MAPK13O15264 365 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 ZNF286BP0CG31 522 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 MESDQ14696 234 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 PLCB4Q15147 1175 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 GLIPR1L2Q4G1C9 344 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 IVNS1ABPQ9Y6Y0 642 aa19.32■□□□□ 0.68
CAPN1-201ENST00000279247 SCN4AP35499 1836 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 DNAJC25-GNG10A0A024R161 153 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 CYP11B1P15538 503 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 CHRNB2P17787 502 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 PDE6CP51160 858 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 HUNKP57058 714 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 CPNE8Q86YQ8 564 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 FAM71AQ8IYT1 594 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 TMEM130Q8N3G9 435 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 BRI3BPQ8WY22 251 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 MROH8Q9H579 483 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 SUCLA2Q9P2R7 463 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-201ENST00000279247 ADCY3O60266 1144 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 TMEM253P0C7T8 217 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 RFX1P22670 979 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 ADCYAP1R1P41586 468 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 TTLL4Q14679 1199 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 WDR44Q5JSH3 913 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 PASD1Q8IV76 773 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 C2orf69Q8N8R5 385 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 AMFRQ9UKV5 643 aa19.31■□□□□ 0.68
CAPN1-201ENST00000279247 B4GALT5O43286 388 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 MAFO75444 373 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-201ENST00000279247 COPB2P35606 906 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 RFC5P40937 340 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 GPC3P51654 580 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 TRADDQ15628 312 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 LLGL2Q6P1M3 1020 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 CEP120Q8N960 986 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 LMBR1Q8WVP7 490 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 SHC3Q92529 594 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 MS4A4AQ96JQ5 239 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 GINS2Q9Y248 185 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 UMODL1Q5DID0 1318 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 ANKRD62A6NC57 917 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 H3BQF6 201 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 GUCY2DQ02846 1103 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 EFCAB12Q6NXP0 572 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 AADACL2Q6P093 401 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 WDR93Q6P2C0 686 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 DPP9Q86TI2 863 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 NT5DC3Q86UY8 548 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 ATP8B4Q8TF62 1192 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms