RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 PTPRHQ9HD43 1115 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 DNAJC12Q9UKB3 198 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 R3HCC1Q9Y3T6 440 aaKnown RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 EPN1Q9Y6I3 576 aaPredicted RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 SCN10AQ9Y5Y9 1956 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 CDH23Q9H251 3354 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 DYNC1I1O14576 645 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 SEPT4O43236 478 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 GPR32O75388 356 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 PIGRP01833 764 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ASGR1P07306 291 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 TNNI1P19237 187 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 GARTP22102 1010 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 CPT1AP50416 773 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 SYT10Q6XYQ8 523 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ZBTB8OSQ8IWT0 167 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 NAA15Q9BXJ9 866 aaKnown RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 UBE2TQ9NPD8 197 aaPredicted RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 A0A1W2PQJ5 194 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ZNF233A6NK53 670 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 FOXN3O00409 490 aaPredicted RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ACKR2O00590 384 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 TOM1L1O75674 476 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 VNN1O95497 513 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ARHGAP25P42331 645 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 DRAP1Q14919 205 aaPredicted RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 OLIG1Q8TAK6 271 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 RAET1EQ8TD07 263 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 NUP58Q9BVL2 599 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 PACSIN1Q9BY11 444 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 EIF2AQ9BY44 585 aaKnown RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 PDZD7Q9H5P4 517 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 HAUS4Q9H6D7 363 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 TSPAN1O60635 241 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 CST3P01034 146 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-201ENST00000278412 RARBP10826 455 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-201ENST00000278412 IBSPP21815 317 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-201ENST00000278412 PTK2Q05397 1052 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 ZNF571Q7Z3V5 609 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-201ENST00000278412 IRF2BP2Q7Z5L9 587 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 EFCAB13Q8IY85 973 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 MTMR12Q9C0I1 747 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 ANK1P16157 1881 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 THSD7BQ9C0I4 1608 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 A0A087X0T9 212 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 MBLAC1A4D2B0 266 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-201ENST00000278412 FAM228BP0C875 321 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 PROZP22891 400 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 HOXA11P31270 313 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-201ENST00000278412 JAM2P57087 298 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 GJA9P57773 515 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 MYBPC2Q14324 1141 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 KIF22Q14807 665 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 TMTC1Q8IUR5 882 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 C7orf31Q8N865 590 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 SLC17A8Q8NDX2 589 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 SALL4Q9UJQ4 1053 aa12.69□□□□□ -0.38
SSRP1-201ENST00000278412 MAGEB2O15479 319 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 INHAP05111 366 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 KIF11P52732 1056 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 EFNA5P52803 228 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 SFMBT2Q5VUG0 894 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 TSHZ1Q6ZSZ6 1077 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 EHBP1Q8NDI1 1231 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 SLC20A1Q8WUM9 679 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 CCDC51Q96ER9 411 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 APOBEC3GQ9HC16 384 aaKnown RBP12.68□□□□□ -0.38
SSRP1-201ENST00000278412 TRMT13Q9NUP7 481 aaKnown RBP12.68□□□□□ -0.38
SSRP1-201ENST00000278412 ADAMTS1Q9UHI8 967 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 NRCAMQ92823 1304 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 MYH10P35580 1976 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 F8VZ95 297 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 CLSTN1O94985 981 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 MAP2K2P36507 400 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 USP8P40818 1118 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 PHKA2P46019 1235 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 CDR1P51861 262 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 BIRC3Q13489 604 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 TFDP1Q14186 410 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 LRRN4CLQ8ND94 238 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
SSRP1-201ENST00000278412 PLCB1Q9NQ66 1216 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 APEX2Q9UBZ4 518 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 CHORDC1Q9UHD1 332 aaPredicted RBP12.68□□□□□ -0.38
SSRP1-201ENST00000278412 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
SSRP1-201ENST00000278412 NFICP08651 508 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 TMOD1P28289 359 aa12.67□□□□□ -0.38
SSRP1-201ENST00000278412 MCL1Q07820 350 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms