RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 FSTL1Q12841 308 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 LRRC14Q15048 493 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ME3Q16798 604 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CCDC152Q4G0S7 254 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 IFIT1BQ5T764 474 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 FAM205BPQ63HN1 556 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 BBS12Q6ZW61 710 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 TRMT1LQ7Z2T5 733 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 LYSMD2Q8IV50 215 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 MRPL41Q8IXM3 137 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 VPS37AQ8NEZ2 397 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 OR8H1Q8NGG4 311 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 LILRB1Q8NHL6 650 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 TRAPPC12Q8WVT3 735 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 TRERF1Q96PN7 1200 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 LGR4Q9BXB1 951 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 KRT23Q9C075 422 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 KAT14Q9H8E8 782 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 DCP1AQ9NPI6 582 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 ATG3Q9NT62 314 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 BABAM1Q9NWV8 329 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 IFNKQ9P0W0 207 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CGNQ9P2M7 1197 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZHX1Q9UKY1 873 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 JAG2Q9Y219 1238 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 FAM50BQ9Y247 325 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZNF451Q9Y4E5 1061 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ADAMTS3O15072 1205 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 NPC1O15118 1278 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 NCK2O43639 380 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 THP07101 528 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 FAM157BP0CG42 384 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 RPL17P18621 184 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 MC4RP32245 332 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SERPINF1P36955 418 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SYCP1Q15431 976 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SPA17Q15506 151 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SLC45A4Q5BKX6 768 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 AGAP9Q5VTM2 703 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 TAF3Q5VWG9 929 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 MSL1Q68DK7 614 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 HIBCHQ6NVY1 386 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 CDC37L1Q7L3B6 337 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CACNA2D4Q7Z3S7 1137 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CRACR2BQ8N4Y2 399 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 C7orf31Q8N865 590 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 BVESQ8NE79 360 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CCDC148Q8NFR7 591 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 PLBD2Q8NHP8 589 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 PPP1R35Q8TAP8 253 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 GPT2Q8TD30 523 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ESR2Q92731 530 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 COA7Q96BR5 231 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SCLT1Q96NL6 688 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SEC62Q99442 399 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 POP1Q99575 1024 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 GSX1Q9H4S2 264 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 PLEKHA5Q9HAU0 1116 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CCM2LQ9NUG4 571 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 TCP11L1Q9NUJ3 509 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ZNF232Q9UNY5 417 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 AKAP11Q9UKA4 1901 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 RPAP1Q9BWH6 1393 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 SOBPA7XYQ1 873 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 HOXC11O43248 304 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 KPNA6O60684 536 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 UBXN7O94888 489 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 YEATS4O95619 227 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 PTPRAP18433 802 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 OAS2P29728 719 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 KIF5BP33176 963 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 MTIF2P46199 727 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 STX17P56962 302 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CCDC92Q53HC0 331 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 FBXO47Q5MNV8 452 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 FKBP15Q5T1M5 1219 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 BEND3Q5T5X7 828 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 RRAGBQ5VZM2 374 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 INTS5Q6P9B9 1019 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 USP51Q70EK9 711 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 NBPF5PQ86XG9 351 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 ANKRD18AQ8IVF6 992 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 SULF2Q8IWU5 870 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CMTR1Q8N1G2 835 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 PAF1Q8N7H5 531 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ANKLE1Q8NAG6 615 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 ADAMTS15Q8TE58 950 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 CCDC12Q8WUD4 166 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 DHX58Q96C10 678 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 AHCYL2Q96HN2 611 aaKnown RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 RNF38Q9H0F5 515 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 C2orf40Q9H1Z8 148 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 STARD7Q9NQZ5 370 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 HELLSQ9NRZ9 838 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 RRN3Q9NYV6 651 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 GRHPRQ9UBQ7 328 aa3.19□□□□□ -1.9
HERC4-201ENST00000277817 C19orf53Q9UNZ5 99 aaPredicted RBP3.19□□□□□ -1.9
HERC4-201ENST00000277817 CNTNAP4Q9C0A0 1308 aa3.18□□□□□ -1.9
HERC4-201ENST00000277817 F5H423 210 aaPredicted RBP3.18□□□□□ -1.9
HERC4-201ENST00000277817 SLC22A3O75751 556 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms