RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 MIF4GDA9UHW6 222 aaKnown RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 PRRG1O14668 218 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 CHRNA3P32297 505 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 NLRP11P59045 1033 aaKnown RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 KLHL38Q2WGJ6 581 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 TAGAPQ8N103 731 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 BHMTQ93088 406 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 LBHD1Q9BQE6 289 aaPredicted RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 SYCE1LA8MT33 242 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 KCNA2P16389 499 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 COG2Q14746 738 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 ADCK2Q7Z695 626 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 MS4A14Q96JA4 679 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 ISCA1Q9BUE6 129 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 GGA3Q9NZ52 723 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
SHPRH-201ENST00000275233 ZNRF3Q9ULT6 936 aa12.57□□□□□ -0.4
SHPRH-201ENST00000275233 TTC26A0AVF1 554 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 PSMD14O00487 310 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 SOX11P35716 441 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 FSCBQ5H9T9 825 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 C1orf146Q5VVC0 180 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 SHC4Q6S5L8 630 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 LRRC71Q8N4P6 559 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 BTBD6Q96KE9 485 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 ZNF560Q96MR9 790 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 MUC3BQ9H195 1237 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 SCOCQ9UIL1 159 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 FLT1P17948 1338 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 DCTN3O75935 186 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 BLVRAP53004 296 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 RHOT1Q8IXI2 618 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 DCUN1D1Q96GG9 259 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 DAGLAQ9Y4D2 1042 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 A0A087WUV0 522 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 KRT17Q04695 432 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 ZC3H12BQ5HYM0 836 aaKnown RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 IZUMO3Q5VZ72 239 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 DHX40Q8IX18 779 aaKnown RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 NSUN4Q96CB9 384 aaKnown RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 FAM118BQ9BPY3 351 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 NCAPD2Q15021 1401 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 CCDC151A5D8V7 595 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 C12orf60Q5U649 245 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 IL31Q6EBC2 164 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 ITPRIPL1Q6GPH6 555 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 CDKL3Q8IVW4 592 aaPredicted RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 DDX56Q9NY93 547 aaKnown RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 MGAT5BQ3V5L5 792 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
SHPRH-201ENST00000275233 NUDCD3Q8IVD9 361 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 ZNF280CQ8ND82 737 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 SNF8Q96H20 258 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 AGPAT1Q99943 283 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 SPON1Q9HCB6 807 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 HACL1Q9UJ83 578 aa12.56□□□□□ -0.4
SHPRH-201ENST00000275233 CYBBP04839 570 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 TYK2P29597 1187 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 OR1G1P47890 313 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 USP11P51784 963 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 CEP55Q53EZ4 464 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 ING2Q9H160 280 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 USP27XA6NNY8 438 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 HLA-DPA1P20036 260 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 SCP2P22307 547 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 TMEM132DQ14C87 1099 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 EPHA7Q15375 998 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 CDC42EP5Q6NZY7 148 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 NRBF2Q96F24 287 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 TGS1Q96RS0 853 aaKnown RBP12.55□□□□□ -0.4
SHPRH-201ENST00000275233 SEL1LQ9UBV2 794 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 TMEM39BQ9GZU3 492 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 PRDM15P57071 1507 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-201ENST00000275233 ZNF185O15231 689 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 RAD51Q06609 339 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 SYTL3Q4VX76 610 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 SPDYAQ5MJ70 313 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 TNIP3Q96KP6 325 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 UNC45AQ9H3U1 944 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 ZNF70Q9UC06 446 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-201ENST00000275233 WARS2Q9UGM6 360 aaKnown RBP12.55□□□□□ -0.4
SHPRH-201ENST00000275233 SPATA31E1Q6ZUB1 1445 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 ATP1A1P05023 1023 aaKnown RBP12.55□□□□□ -0.4
SHPRH-201ENST00000275233 HOXA7P31268 230 aaPredicted RBP12.55□□□□□ -0.4
SHPRH-201ENST00000275233 SLC25A41Q8N5S1 370 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■□□ 16
SHPRH-201ENST00000275233 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 TRIM33Q9UPN9 1127 aa12.55□□□□□ -0.4
SHPRH-201ENST00000275233 MBD5Q9P267 1494 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms