RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 STK33Q9BYT3 514 aa26.5■■□□□ 1.83
R3HCC1-201ENST00000265806 TOPORSQ9NS56 1045 aaPredicted RBP26.5■■□□□ 1.83
R3HCC1-201ENST00000265806 HDAC6Q9UBN7 1215 aa26.5■■□□□ 1.83
R3HCC1-201ENST00000265806 AJAP1Q9UKB5 411 aaPredicted RBP26.5■■□□□ 1.83
R3HCC1-201ENST00000265806 SERPING1P05155 500 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 ZNF568Q3ZCX4 644 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 SLC9C1Q4G0N8 1177 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 DNTTIP2Q5QJE6 756 aaKnown RBP26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 GJB7Q6PEY0 223 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 C7orf31Q8N865 590 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 SCLT1Q96NL6 688 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 FAM49AQ9H0Q0 323 aaPredicted RBP26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 PDE11AQ9HCR9 933 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 XPNPEP3Q9NQH7 507 aa26.49■■□□□ 1.83
R3HCC1-201ENST00000265806 EIF3CLB5ME19 914 aaKnown RBP26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 KIF2AO00139 706 aaPredicted RBP26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 FKTNO75072 461 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 GPR32O75388 356 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 PLEKP08567 350 aaPredicted RBP26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 HARSP12081 509 aaKnown RBP26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 WNT7BP56706 349 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 ARHGEF6Q15052 776 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 EEF1DP3Q658K8 133 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 PHLDB3Q6NSJ2 640 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 RUFY4Q6ZNE9 571 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 ACRBPQ8NEB7 543 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 FBXL13Q8NEE6 735 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 RAET1EQ8TD07 263 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 PPP1R13LQ8WUF5 828 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 EIF3CQ99613 913 aaKnown RBP26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 DNAJC12Q9UKB3 198 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 CPSF3Q9UKF6 684 aaKnown RBP26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 TREHO43280 583 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 TUBB4AP04350 444 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 TNNT1P13805 278 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 CST5P28325 142 aaPredicted RBP26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 ASIC2Q16515 512 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 TMEM132AQ24JP5 1023 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 ZNF710Q8N1W2 664 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 KLHDC9Q8NEP7 349 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 ZNF516Q92618 1163 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 VTI1AQ96AJ9 217 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 CGRRF1Q99675 332 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 CDT1Q9H211 546 aa26.48■■□□□ 1.83
R3HCC1-201ENST00000265806 CSDE1O75534 798 aaKnown RBP26.47■■□□□ 1.83
R3HCC1-201ENST00000265806 EIF4A3P38919 411 aaKnown RBP26.47■■□□□ 1.83
R3HCC1-201ENST00000265806 KIZQ2M2Z5 673 aa26.47■■□□□ 1.83
R3HCC1-201ENST00000265806 CXCL17Q6UXB2 119 aa26.47■■□□□ 1.83
R3HCC1-201ENST00000265806 FMNL3Q8IVF7 1028 aa26.47■■□□□ 1.83
R3HCC1-201ENST00000265806 GCOM2Q9BZD3 368 aaPredicted RBP26.47■■□□□ 1.83
R3HCC1-201ENST00000265806 REXO2Q9Y3B8 237 aaKnown RBP26.47■■□□□ 1.83
R3HCC1-201ENST00000265806 TRIP12Q14669 1992 aaPredicted RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 TNNI1P19237 187 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 TNFSF9P41273 254 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 KRT83P78385 493 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 PCBP1Q15365 356 aaKnown RBP eCLIP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 ASTE1Q2TB18 679 aaPredicted RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 ZACNQ401N2 412 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 SEZ6Q53EL9 994 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 IRF2BP2Q7Z5L9 587 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 SEMA4DQ92854 862 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 RAB20Q9NX57 234 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 BZW2Q9Y6E2 419 aaKnown RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 F8VZ95 297 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 LCA5LO95447 670 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 C4BPAP04003 597 aaKnown RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 MCF2P10911 925 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 ARF4P18085 180 aaPredicted RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 PRKCIP41743 596 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 PRMT2P55345 433 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 ZNF200P98182 395 aaPredicted RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 SURF1Q15526 300 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 TDRD12Q587J7 1177 aaKnown RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 NME8Q8N427 588 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 TAS1R2Q8TE23 839 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 ZNF296Q8WUU4 475 aaPredicted RBP26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 DNAJB3Q8WWF6 145 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 PDZD7Q9H5P4 517 aa26.46■■□□□ 1.83
R3HCC1-201ENST00000265806 TSPAN1O60635 241 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 LRRN2O75325 713 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 ERLIN2O94905 339 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 IPO7O95373 1038 aaKnown RBP26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 STAT1P42224 750 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 KIF11P52732 1056 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 POU5F1Q01860 360 aaKnown RBP26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 KLHL30Q0D2K2 578 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 DRAP1Q14919 205 aaPredicted RBP26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 CCSAPQ6IQ19 270 aaPredicted RBP26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 DEF6Q9H4E7 631 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 GTF2IRD1Q9UHL9 959 aa26.45■■□□□ 1.82
R3HCC1-201ENST00000265806 ZC3H11AO75152 810 aaKnown RBP eCLIP26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 SOX5P35711 763 aa26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 AP3M2P53677 418 aa26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 NBPF20Q3BBV1 942 aa26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 TAF2Q6P1X5 1199 aa26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 GPR88Q9GZN0 384 aa26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 DDX20Q9UHI6 824 aaKnown RBP26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 PTPRJQ12913 1337 aa26.44■■□□□ 1.82
R3HCC1-201ENST00000265806 A0A1B0GUA9 196 aa26.43■■□□□ 1.82
R3HCC1-201ENST00000265806 FERP16591 822 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms