RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TMEM88BA6NKF7 163 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 P4HA2O15460 535 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 TLR2O60603 784 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 ATP4AP20648 1035 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 EDNRBP24530 442 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 HLTFQ14527 1009 aaKnown RBP eCLIP10.03□□□□□ -0.8
SSR3-201ENST00000265044 WDR72Q3MJ13 1102 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 EPC2Q52LR7 807 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 ZNF667Q5HYK9 610 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 LIN9Q5TKA1 542 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 DCUN1D2Q6PH85 259 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 RUFY1Q96T51 708 aa10.03□□□□□ -0.8
SSR3-201ENST00000265044 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
SSR3-201ENST00000265044 PACSIN2Q9UNF0 486 aaPredicted RBP10.03□□□□□ -0.8
SSR3-201ENST00000265044 DIS3Q9Y2L1 958 aaKnown RBP10.03□□□□□ -0.8
SSR3-201ENST00000265044 MYH11P35749 1972 aa10.02□□□□□ -0.8
SSR3-201ENST00000265044 FTLP02792 175 aaPredicted RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 SMPD1P17405 629 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 TCP1P17987 556 aaKnown RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 RFX1P22670 979 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 HOXD10P28358 340 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 FAM193AP78312 1265 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 CRHR2Q13324 411 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 LLGL1Q15334 1064 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 MEA1Q16626 185 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 CCL14Q16627 93 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 WHAMMP3Q1A5X7 153 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 DEFB115Q30KQ5 88 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 HSP90B2PQ58FF3 399 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 C10orf76Q5T2E6 689 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ABRAQ8N0Z2 381 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 NPLOC4Q8TAT6 608 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 SOCS4Q8WXH5 440 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 BAP1Q92560 729 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 SYN2Q92777 582 aaPredicted RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 OSMRQ99650 979 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 MTMR12Q9C0I1 747 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 DNAI2Q9GZS0 605 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ADGRA3Q8IWK6 1321 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 LRRIQ3A6PVS8 624 aaPredicted RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 NCK2O43639 380 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ABL1P00519 1130 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ATP1A1P05023 1023 aaKnown RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 RTP1P59025 263 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 TNNC1P63316 161 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 CFAP221Q4G0U5 840 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 SPOPLQ6IQ16 392 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ZNF571Q7Z3V5 609 aaPredicted RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 ADAT2Q7Z6V5 191 aaKnown RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 IFNL1Q8IU54 200 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 CCDC50Q8IVM0 306 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 PPTC7Q8NI37 304 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 KAT5Q92993 513 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 TATDN2Q93075 761 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 FAM81BQ96LP2 452 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ACAP3Q96P50 834 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 AGPAT1Q99943 283 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ARHGAP28Q9P2N2 729 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 SLC45A1Q9Y2W3 748 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ANKRD62A6NC57 917 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 F8VZ95 297 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 PGK1P00558 417 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 YWHAEP62258 255 aaKnown RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 NFRKBQ6P4R8 1299 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 SRGAP1Q7Z6B7 1085 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 RASAL3Q86YV0 1011 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 DHX38Q92620 1227 aaKnown RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 NTPCRQ9BSD7 190 aaKnown RBP10.02□□□□□ -0.81
SSR3-201ENST00000265044 KATNAL1Q9BW62 490 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 PLVAPQ9BX97 442 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 PACSIN1Q9BY11 444 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 ARFGAP3Q9NP61 516 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 NAGPAQ9UK23 515 aa10.02□□□□□ -0.81
SSR3-201ENST00000265044 EFCAB8A8MWE9 144 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 TLR3O15455 904 aaKnown RBP10.01□□□□□ -0.81
SSR3-201ENST00000265044 B4GALT5O43286 388 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 ALDH1A1P00352 501 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 ADSSP30520 456 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 FLT3LGP49771 235 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 GALCP54803 685 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 NOP14P78316 857 aaKnown RBP10.01□□□□□ -0.81
SSR3-201ENST00000265044 SKIDA1Q1XH10 827 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 ZNF792Q3KQV3 632 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 MPZL3Q6UWV2 235 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 ARHGEF19Q8IW93 802 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 KLHL7Q8IXQ5 586 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 SLC30A5Q8TAD4 765 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 DNAJB3Q8WWF6 145 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 KIF12Q96FN5 646 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 FIZ1Q96SL8 496 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 PCYT2Q99447 389 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 GOLPH3Q9H4A6 298 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 MORF4L1Q9UBU8 362 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 CHORDC1Q9UHD1 332 aaPredicted RBP10.01□□□□□ -0.81
SSR3-201ENST00000265044 TSKSQ9UJT2 592 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 ACKR2O00590 384 aa10.01□□□□□ -0.81
SSR3-201ENST00000265044 NOL4O94818 638 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms