RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 APOBEC3FQ8IUX4 373 aaKnown RBP21.17■□□□□ 0.98
CSPG5-201ENST00000264723 GDF3Q9NR23 364 aa21.17■□□□□ 0.98
CSPG5-201ENST00000264723 ATP11AP98196 1134 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 CLUL1Q15846 466 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 MAPK6Q16659 721 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 CASC4Q6P4E1 433 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 C15orf52Q6ZUT6 534 aaKnown RBP21.16■□□□□ 0.98
CSPG5-201ENST00000264723 MICAL1Q8TDZ2 1067 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 RSAD2Q8WXG1 361 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 TCP11X1B4DZS4 312 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 OSBPP22059 807 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 SCP2P22307 547 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 CHRNA3P32297 505 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 ADCY2Q08462 1091 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 ZNF720Q7Z2F6 126 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 XPO6Q96QU8 1125 aaKnown RBP21.16■□□□□ 0.98
CSPG5-201ENST00000264723 CALN1Q9BXU9 219 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 IFRD2Q12894 506 aaPredicted RBP21.16■□□□□ 0.98
CSPG5-201ENST00000264723 TFDP1Q14186 410 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 DNAJC24Q6P3W2 148 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 FBXL13Q8NEE6 735 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 RIT2Q99578 217 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 MYH8P13535 1937 aa21.16■□□□□ 0.98
CSPG5-201ENST00000264723 EXOC1LA0A1B0GW35 172 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 GGPS1O95749 300 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 MARCKSL1P49006 195 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 SNRNP35Q16560 246 aaKnown RBP21.15■□□□□ 0.98
CSPG5-201ENST00000264723 CROCCP2Q86T23 111 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 NT5DC3Q86UY8 548 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 ANKRD36BP1Q96IX9 119 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 UBXN6Q9BZV1 441 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 SAYSD1Q9NPB0 183 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 RBAKQ9NYW8 714 aaPredicted RBP21.15■□□□□ 0.98
CSPG5-201ENST00000264723 AGO2Q9UKV8 859 aaKnown RBP21.15■□□□□ 0.98
CSPG5-201ENST00000264723 ICAM1P05362 532 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 SPATA31C1P0DKV0 1188 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 RNF149Q8NC42 400 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 FAM149B1Q96BN6 582 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 TRAF3IP3Q9Y228 551 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 PLSCR1O15162 318 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 P4HA1P13674 534 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 CCNA1P78396 465 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 IFI35P80217 286 aaPredicted RBP21.15■□□□□ 0.98
CSPG5-201ENST00000264723 ARMC9Q7Z3E5 817 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 SLC47A2Q86VL8 602 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 KIF2BQ8N4N8 673 aa21.15■□□□□ 0.98
CSPG5-201ENST00000264723 PURBQ96QR8 312 aaKnown RBP21.15■□□□□ 0.98
CSPG5-201ENST00000264723 POLR3CQ9BUI4 534 aaPredicted RBP21.15■□□□□ 0.98
CSPG5-201ENST00000264723 TULP2O00295 520 aa21.14■□□□□ 0.98
CSPG5-201ENST00000264723 KRT1P04264 644 aa21.14■□□□□ 0.98
CSPG5-201ENST00000264723 ATP2A2P16615 1042 aaKnown RBP21.14■□□□□ 0.98
CSPG5-201ENST00000264723 POLR2BP30876 1174 aaKnown RBP21.14■□□□□ 0.98
CSPG5-201ENST00000264723 CA8P35219 290 aa21.14■□□□□ 0.98
CSPG5-201ENST00000264723 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.14■□□□□ 0.98
CSPG5-201ENST00000264723 PSPC1Q8WXF1 523 aaKnown RBP21.14■□□□□ 0.98
CSPG5-201ENST00000264723 ACSF2Q96CM8 615 aaPredicted RBP21.14■□□□□ 0.98
CSPG5-201ENST00000264723 CALR3Q96L12 384 aaKnown RBP21.14■□□□□ 0.98
CSPG5-201ENST00000264723 TXNDC16Q9P2K2 825 aa21.14■□□□□ 0.98
CSPG5-201ENST00000264723 HESX1Q9UBX0 185 aa21.14■□□□□ 0.98
CSPG5-201ENST00000264723 NR2E1Q9Y466 385 aa21.14■□□□□ 0.98
CSPG5-201ENST00000264723 PCK1P35558 622 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 ERFP50548 548 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 ACTRT1Q8TDG2 376 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 N4BP2L2Q92802 583 aaPredicted RBP21.14■□□□□ 0.97
CSPG5-201ENST00000264723 TMEM117Q9H0C3 514 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.14■□□□□ 0.97
CSPG5-201ENST00000264723 HSPA6P17066 643 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 STAT5BP51692 787 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 PRKCEQ02156 737 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 ZRSR2Q15696 482 aaKnown RBP21.14■□□□□ 0.97
CSPG5-201ENST00000264723 ARHGEF19Q8IW93 802 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 PALM2Q8IXS6 379 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 RASA4BC9J798 803 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 RASA4O43374 803 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 PLS3P13797 630 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 VCAM1P19320 739 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 CA4P22748 312 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 ZNF568Q3ZCX4 644 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 GRK7Q8WTQ7 553 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 ZWILCHQ9H900 591 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 KCNMB3Q9NPA1 279 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 FGFR1OP2Q9NVK5 253 aa21.14■□□□□ 0.97
CSPG5-201ENST00000264723 APBB1IPQ7Z5R6 666 aaPredicted RBP21.13■□□□□ 0.97
CSPG5-201ENST00000264723 LRRC34Q8IZ02 419 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 MAIP1Q8WWC4 291 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 MYCBPQ99417 103 aaPredicted RBP21.13■□□□□ 0.97
CSPG5-201ENST00000264723 PPP1R12CQ9BZL4 782 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 ALG13Q9NP73 1137 aaKnown RBP21.13■□□□□ 0.97
CSPG5-201ENST00000264723 SHBGP04278 402 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 YWHAEP62258 255 aaKnown RBP21.13■□□□□ 0.97
CSPG5-201ENST00000264723 ITIH3Q06033 890 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 BYSLQ13895 437 aaKnown RBP21.13■□□□□ 0.97
CSPG5-201ENST00000264723 KRT81Q14533 505 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 HADHQ16836 314 aaKnown RBP21.13■□□□□ 0.97
CSPG5-201ENST00000264723 CDO1Q16878 200 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 PALB2Q86YC2 1186 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 IQCKQ8N0W5 287 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 GMCL1P1Q8NEA9 526 aa21.13■□□□□ 0.97
CSPG5-201ENST00000264723 LNX1Q8TBB1 728 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms