RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 WDR72Q3MJ13 1102 aa17.77■□□□□ 0.44
PHRF1-201ENST00000264555 FAM102AQ5T9C2 384 aaPredicted RBP17.77■□□□□ 0.44
PHRF1-201ENST00000264555 SRRM1Q8IYB3 904 aaKnown RBP17.77■□□□□ 0.44
PHRF1-201ENST00000264555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.77■□□□□ 0.44
PHRF1-201ENST00000264555 ARHGEF6Q15052 776 aa17.77■□□□□ 0.43
PHRF1-201ENST00000264555 IZUMO3Q5VZ72 239 aa17.77■□□□□ 0.43
PHRF1-201ENST00000264555 TRIM65Q6PJ69 517 aa17.77■□□□□ 0.43
PHRF1-201ENST00000264555 LRIG3Q6UXM1 1119 aa17.77■□□□□ 0.43
PHRF1-201ENST00000264555 HACL1Q9UJ83 578 aa17.77■□□□□ 0.43
PHRF1-201ENST00000264555 HPCAL4Q9UM19 191 aa17.77■□□□□ 0.43
PHRF1-201ENST00000264555 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.43
PHRF1-201ENST00000264555 MMP14P50281 582 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 SH3RF1Q7Z6J0 888 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 RCOR2Q8IZ40 523 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 SMARCAL1Q9NZC9 954 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 NAGPAQ9UK23 515 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 WDR91A4D1P6 747 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 GSTA1P08263 222 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 GSTA2P09210 222 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 ARP10275 920 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 PMS1P54277 932 aaKnown RBP17.76■□□□□ 0.43
PHRF1-201ENST00000264555 ATG16L1Q676U5 607 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 SAMD7Q7Z3H4 446 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 RBBP8NLQ8NC74 664 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-201ENST00000264555 KIF12Q96FN5 646 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 ACAP3Q96P50 834 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 MAPK13O15264 365 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 CYTH3O43739 400 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 SLC25A27O95847 323 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 PRLRP16471 622 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 GJB7Q6PEY0 223 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 SENP7Q9BQF6 1050 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 SCAF8Q9UPN6 1271 aaKnown RBP17.76■□□□□ 0.43
PHRF1-201ENST00000264555 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-201ENST00000264555 MRC1P22897 1456 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 A0A087X0T9 212 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 LPXNO60711 386 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 NOL3O60936 208 aaKnown RBP17.76■□□□□ 0.43
PHRF1-201ENST00000264555 FAM228BP0C875 321 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 ZNF677Q86XU0 584 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 SMYD2Q9NRG4 433 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 LRFN2Q9ULH4 789 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 HLA-DRAP01903 254 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 KRT3P12035 628 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 TBX2Q13207 712 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-201ENST00000264555 E2F4Q16254 413 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 KIAA0895Q8NCT3 520 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 ALG6Q9Y672 507 aa17.76■□□□□ 0.43
PHRF1-201ENST00000264555 WTIPA6NIX2 430 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-201ENST00000264555 GOLGA8MH3BSY2 632 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 THOC5Q13769 683 aaKnown RBP17.75■□□□□ 0.43
PHRF1-201ENST00000264555 NLRP14Q86W24 1093 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 WDR35Q9P2L0 1181 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 GOLGA8QA0A0J9YX86 632 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 GOLGA8OA6NCC3 632 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 GOLGA8NF8WBI6 632 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 RAD51CO43502 376 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 KRT38O76015 456 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 SSTR3P32745 418 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-201ENST00000264555 MAP2K2P36507 400 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 MAP7Q14244 749 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 DDX4Q9NQI0 724 aaKnown RBP17.75■□□□□ 0.43
PHRF1-201ENST00000264555 ASAP2O43150 1006 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 KPNA2P52292 529 aaKnown RBP17.75■□□□□ 0.43
PHRF1-201ENST00000264555 PSMD6Q15008 389 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 PRAMEF18Q5VWM3 479 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 PAPD7Q5XG87 772 aaKnown RBP17.75■□□□□ 0.43
PHRF1-201ENST00000264555 C18orf8Q96DM3 657 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 IDI2Q9BXS1 227 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 MID2Q9UJV3 735 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 STAP1Q9ULZ2 295 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 GOLGA8CPA6NN73 597 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 BRAFP15056 766 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 BCAR1P56945 870 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 RCN2Q14257 317 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 PNMA5Q96PV4 448 aa17.75■□□□□ 0.43
PHRF1-201ENST00000264555 A8MXQ7 604 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 TOM1L1O75674 476 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 COMTP21964 271 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 HERVK_113P62684 666 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 ROR1Q01973 937 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 EZH2Q15910 746 aaKnown RBP17.74■□□□□ 0.43
PHRF1-201ENST00000264555 BEND6Q5SZJ8 279 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-201ENST00000264555 TPCN2Q8NHX9 752 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 TRIM51Q9BSJ1 452 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 MYO1CO00159 1063 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 TXNDC9O14530 226 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 COPEO14579 308 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 GPC4O75487 556 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 BYSLQ13895 437 aaKnown RBP17.74■□□□□ 0.43
PHRF1-201ENST00000264555 BAG2O95816 211 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 CDC42EP1Q00587 391 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 PDIA2Q13087 525 aaKnown RBP17.74■□□□□ 0.43
PHRF1-201ENST00000264555 TMEM119Q4V9L6 283 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
PHRF1-201ENST00000264555 THEM5Q8N1Q8 247 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 TRAIPQ9BWF2 469 aa17.74■□□□□ 0.43
PHRF1-201ENST00000264555 CPSF3Q9UKF6 684 aaKnown RBP17.74■□□□□ 0.43
PHRF1-201ENST00000264555 GAKO14976 1311 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms