RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 FBXO40Q9UH90 709 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 CSADQ9Y600 493 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 ALG6Q9Y672 507 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 NFASCO94856 1347 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 A0A0A6YYK5 440 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 TCRBV7S2A1N4TA0A589 114 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 MAFGO15525 162 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 FARP2O94887 1054 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 GGPS1O95749 300 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 CYP11B1P15538 503 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 GJC2Q5T442 439 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 FOXR1Q6PIV2 292 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 PASD1Q8IV76 773 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 MCPH1Q8NEM0 835 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 RDM1Q8NG50 284 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 SHC3Q92529 594 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 ZIM3Q96PE6 472 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 PPP1R16BQ96T49 567 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 TIPINQ9BVW5 301 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 ASCC2Q9H1I8 757 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 CNMDO75829 334 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 NF2P35240 595 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 TNFSF9P41273 254 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 AARSP49588 968 aaKnown RBP eCLIP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 BIRC3Q13489 604 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 HSDL1Q3SXM5 330 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 TDRD10Q5VZ19 366 aaKnown RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 CRELD2Q6UXH1 353 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 FBXO16Q8IX29 292 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 IFT20Q8IY31 132 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 OR2W6PQ8NHA6 318 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 ACTRT1Q8TDG2 376 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 CPA5Q8WXQ8 436 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 GLG1Q92896 1179 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 PBKQ96KB5 322 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 NT5C1BQ96P26 610 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 IWS1Q96ST2 819 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 INTUQ9ULD6 942 aa11.25□□□□□ -0.61
COMMD9-201ENST00000263401 MAFBQ9Y5Q3 323 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-201ENST00000263401 DAPK3O43293 454 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 CSDE1O75534 798 aaKnown RBP11.24□□□□□ -0.61
COMMD9-201ENST00000263401 COMTP21964 271 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 ECHS1P30084 290 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 TCF7P36402 384 aaPredicted RBP11.24□□□□□ -0.61
COMMD9-201ENST00000263401 TNNC1P63316 161 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 OR5B17Q8NGF7 314 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 ZNF653Q96CK0 615 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 FBXL18Q96ME1 805 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 VIPAS39Q9H9C1 493 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 LRRC4CQ9HCJ2 640 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 RNF14Q9UBS8 474 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 GJB6O95452 261 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 MFAP3P55082 362 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 CAPSQ13938 189 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 TTMPQ5BVD1 217 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 ZDHHC14Q8IZN3 488 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 DEPTORQ8TB45 409 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 CDHR1Q96JP9 859 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 NUP85Q9BW27 656 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 ISCUQ9H1K1 167 aa11.24□□□□□ -0.61
COMMD9-201ENST00000263401 AGO2Q9UKV8 859 aaKnown RBP11.24□□□□□ -0.61
COMMD9-201ENST00000263401 EVPLQ92817 2033 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 ZNF233A6NK53 670 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 K7ERI5 159 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 P4HA2O15460 535 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 VNN1O95497 513 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 HLA-DRAP01903 254 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 CCDC172P0C7W6 258 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 ANXA13P27216 316 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 GPC3P51654 580 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 GPC5P78333 572 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 SYCE1Q8N0S2 351 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 PIK3R5Q8WYR1 880 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 DDX1Q92499 740 aaKnown RBP11.23□□□□□ -0.61
COMMD9-201ENST00000263401 ACBD3Q9H3P7 528 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
COMMD9-201ENST00000263401 APOBEC3GQ9HC16 384 aaKnown RBP11.23□□□□□ -0.61
COMMD9-201ENST00000263401 PDGFCQ9NRA1 345 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 PNMA2Q9UL42 364 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
COMMD9-201ENST00000263401 YBX3P16989 372 aaKnown RBP eCLIP11.23□□□□□ -0.61
COMMD9-201ENST00000263401 PIK3CAP42336 1068 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 OSTNP61366 133 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 STRN3Q13033 797 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 BRDTQ58F21 947 aaPredicted RBP11.23□□□□□ -0.61
COMMD9-201ENST00000263401 RIOX2Q8IUF8 465 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 SLC7A3Q8WY07 619 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 FGD4Q96M96 766 aa11.23□□□□□ -0.61
COMMD9-201ENST00000263401 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms