RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 BRSK2Q8IWQ3 736 aa24.83■■□□□ 1.57
SMARCB1-201ENST00000263121 GCOM2Q9BZD3 368 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-201ENST00000263121 CDT1Q9H211 546 aa24.83■■□□□ 1.57
SMARCB1-201ENST00000263121 DAAM1Q9Y4D1 1078 aa24.83■■□□□ 1.57
SMARCB1-201ENST00000263121 TRIM17Q9Y577 477 aa24.83■■□□□ 1.57
SMARCB1-201ENST00000263121 PTCH2Q9Y6C5 1203 aa24.83■■□□□ 1.57
SMARCB1-201ENST00000263121 USP27XA6NNY8 438 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 DLATP10515 647 aaKnown RBP24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 ARF4P18085 180 aaPredicted RBP24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 TNFSF9P41273 254 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 TMEM132AQ24JP5 1023 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 SEZ6Q53EL9 994 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 TAF2Q6P1X5 1199 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 C15orf39Q6ZRI6 1047 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 TOGARAM2Q6ZUX3 1019 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 ZNF710Q8N1W2 664 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 NME8Q8N427 588 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 PDZD7Q9H5P4 517 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 CDHR5Q9HBB8 845 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 PDE11AQ9HCR9 933 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 CPSF3Q9UKF6 684 aaKnown RBP24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 MYO6Q9UM54 1294 aa24.82■■□□□ 1.56
SMARCB1-201ENST00000263121 CLCN1P35523 988 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 RNF180Q86T96 592 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 ZNF516Q92618 1163 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 FNBP1Q96RU3 617 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 HMX1Q9NP08 348 aaPredicted RBP24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 AJAP1Q9UKB5 411 aaPredicted RBP24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 FRMPD3Q5JV73 1810 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 ERLIN2O94905 339 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 DARSP14868 501 aaKnown RBP24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 PCBP1Q15365 356 aaKnown RBP eCLIP24.81■■□□□ 1.563e-10■■■□□ 18.2
SMARCB1-201ENST00000263121 IQCEQ6IPM2 695 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 GDF6Q6KF10 455 aaPredicted RBP24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 SV2AQ7L0J3 742 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 CDR2LQ86X02 465 aaPredicted RBP24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 CPB2Q96IY4 423 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 OSMRQ99650 979 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 BEGAINQ9BUH8 593 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 APEX2Q9UBZ4 518 aa24.81■■□□□ 1.56
SMARCB1-201ENST00000263121 GRIN2DO15399 1336 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 MCF2P10911 925 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 HSPA6P17066 643 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 JAM2P57087 298 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 SFMBT2Q5VUG0 894 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 LHX8Q68G74 356 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 GJB7Q6PEY0 223 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 CGRRF1Q99675 332 aa24.8■■□□□ 1.56
SMARCB1-201ENST00000263121 PTPRJQ12913 1337 aa24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 A0A1B0GUA9 196 aa24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 MYCNP04198 464 aaPredicted RBP24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 RFX1P22670 979 aa24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 TRMT1Q9NXH9 659 aaKnown RBP24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 AIPL1Q9NZN9 384 aa24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 GINS2Q9Y248 185 aa24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 PPP2R2CQ9Y2T4 447 aa24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 CENPFP49454 3210 aa24.79■■□□□ 1.56
SMARCB1-201ENST00000263121 CABYRO75952 493 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 FGFR4P22455 802 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 EIF4BP23588 611 aaKnown RBP24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 PHLDB3Q6NSJ2 640 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 THNSL1Q8IYQ7 743 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 FBXL13Q8NEE6 735 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 TAS1R2Q8TE23 839 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 SEMA4DQ92854 862 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 PPP1R13BQ96KQ4 1090 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 DESI2Q9BSY9 194 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 ARHGAP20Q9P2F6 1191 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 ADGRG1Q9Y653 693 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 CCP110O43303 1012 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 LRRN2O75325 713 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 C4BPAP04003 597 aaKnown RBP24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 TNNI1P19237 187 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 ACLYP53396 1101 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 CRYBB1P53674 252 aaPredicted RBP24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 RAPGEF1Q13905 1077 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 SNX17Q15036 470 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 ZACNQ401N2 412 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 FAM47CQ5HY64 1035 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 HGSNATQ68CP4 663 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 SERINC5Q86VE9 423 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 CCDC170Q8IYT3 715 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 CEP120Q8N960 986 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 SPAG5Q96R06 1193 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 NHEJ1Q9H9Q4 299 aaPredicted RBP24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 DNAJC12Q9UKB3 198 aa24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 EPN1Q9Y6I3 576 aaPredicted RBP24.78■■□□□ 1.56
SMARCB1-201ENST00000263121 NDUFA10O95299 355 aa24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 HOXA11P31270 313 aaPredicted RBP24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 POU5F1Q01860 360 aaKnown RBP24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 SURF1Q15526 300 aa24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 ENOX2Q16206 610 aaKnown RBP24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 LMBRD2Q68DH5 695 aaPredicted RBP24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 TMEM40Q8WWA1 233 aa24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 TSEN34Q9BSV6 310 aaKnown RBP24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 STK33Q9BYT3 514 aa24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 RAB20Q9NX57 234 aa24.77■■□□□ 1.56
SMARCB1-201ENST00000263121 MOXD2PA6NHM9 499 aa24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 TULP1O00294 542 aaPredicted RBP24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 ZSCAN12O43309 604 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms