RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 EDRF1Q3B7T1 1238 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 ZBTB41Q5SVQ8 909 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 ANKRD40Q6AI12 368 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 FAM117BQ6P1L5 589 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 CRELD2Q6UXH1 353 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 ZNF689Q96CS4 500 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 SAAL1Q96ER3 474 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 FBXL18Q96ME1 805 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 ACAP3Q96P50 834 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 RSAD1Q9HA92 442 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 RC3H2Q9HBD1 1191 aaKnown RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 DMAC2Q9NW81 257 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 PARP2Q9UGN5 583 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 COLQQ9Y215 455 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 A0A1W2PPC1 479 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 EXTL3O43909 919 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 OFD1O75665 1012 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 NR3C1P04150 777 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 ACOT2P49753 483 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 HTRA4P83105 476 aaPredicted RBP18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 LRRC63Q05C16 580 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 PAK1Q13153 545 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 CLLU1OSQ5K130 101 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 FAM109BQ6ICB4 259 aaPredicted RBP18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 FOXR2Q6PJQ5 311 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 GPD1LQ8N335 351 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 XXYLT1Q8NBI6 393 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 NELFBQ8WX92 580 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 FAM213AQ9BRX8 229 aa18.12■□□□□ 0.49
CHCHD3-201ENST00000262570 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 SYCE3A1L190 88 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 TRIM49BA6NDI0 452 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 GRXCR1A8MXD5 290 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 INPPL1O15357 1258 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 CYP2J2P51589 502 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 YARSP54577 528 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 POU5F1Q01860 360 aaKnown RBP18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 ZSCAN23Q3MJ62 389 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 CT47A1Q5JQC4 288 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 TTI2Q6NXR4 508 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 GLB1LQ6UWU2 654 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 ALKAL1Q6UXT8 129 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 GSTCDQ8NEC7 633 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 HELQQ8TDG4 1101 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 RSPH1Q8WYR4 309 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 CASD1Q96PB1 797 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 GAD1Q99259 594 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 RAD9AQ99638 391 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 ZBED2Q9BTP6 218 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 TMEM117Q9H0C3 514 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 KIAA1586Q9HCI6 787 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 TOPORSQ9NS56 1045 aaPredicted RBP18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 ANO10Q9NW15 660 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 DACH1Q9UI36 760 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 CTNND2Q9UQB3 1225 aa18.11■□□□□ 0.49
CHCHD3-201ENST00000262570 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 BICDL2A1A5D9 508 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 GOLGA8IPA6NC78 632 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 ARL5CA6NH57 179 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 GOLGA8JA6NMD2 632 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 MEFVO15553 781 aaPredicted RBP18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 ADRB2P07550 413 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 NR2F2P24468 414 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 RPL13P26373 211 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 MLH1P40692 756 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 GATMP50440 423 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 AFF1P51825 1210 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 TYRO3Q06418 890 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 ADAM9Q13443 819 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 ENOX2Q16206 610 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 STX1AQ16623 288 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 SLC10A6Q3KNW5 377 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 XKR4Q5GH76 650 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 ABI1Q8IZP0 508 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 ZFP42Q96MM3 310 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 MED15Q96RN5 788 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 TSG101Q99816 390 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 FUCA2Q9BTY2 467 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 CXCL16Q9H2A7 254 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 RPF1Q9H9Y2 349 aaKnown RBP18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 KLK14Q9P0G3 267 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 RWDD2AQ9UIY3 292 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 INSL6Q9Y581 213 aa18.1■□□□□ 0.49
CHCHD3-201ENST00000262570 TTC26A0AVF1 554 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 TLL1O43897 1013 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 EXOC3O60645 756 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 CXCL8P10145 99 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 ERCC5P28715 1186 aaPredicted RBP18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 STX17P56962 302 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 CBWD2Q8IUF1 395 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 ZC3H3Q8IXZ2 948 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 SNX27Q96L92 541 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 YME1L1Q96TA2 773 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 DUSP9Q99956 384 aaKnown RBP18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 PLEKHA5Q9HAU0 1116 aa18.09■□□□□ 0.49
CHCHD3-201ENST00000262570 ZNF233A6NK53 670 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 TBKBP1A7MCY6 615 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 CCDC192P0DO97 292 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms