RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 MIER3Q7Z3K6 550 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 PAIP2Q9BPZ3 127 aaKnown RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 FAM129AQ9BZQ8 928 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 TRPC6Q9Y210 931 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 MYH11P35749 1972 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 FAM187AA6NFU0 413 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 SLC16A4O15374 487 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 RASSF9O75901 435 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 DAB2IPQ5VWQ8 1189 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 KIRREL3Q8IZU9 778 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 THOC1Q96FV9 657 aaKnown RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 PWWP2AQ96N64 755 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 ZSWIM1Q9BR11 485 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 HEMGNQ9BXL5 484 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 EPB41L4BQ9H329 900 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 TUFT1Q9NNX1 390 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 LARSQ9P2J5 1176 aaKnown RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 TCEAL9Q9UHQ7 104 aa15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 TPX2Q9ULW0 747 aaKnown RBP15.53■□□□□ 0.08
SFSWAP-201ENST00000261674 SYNGAP1Q96PV0 1343 aa15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 CAP2P40123 477 aa15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 MXI1P50539 228 aa15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 PEX3P56589 373 aa15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 DHX34Q14147 1143 aaKnown RBP15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 TATDN1Q6P1N9 297 aa15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 ZNF564Q8TBZ8 553 aaPredicted RBP15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 MRRFQ96E11 262 aaKnown RBP15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 CLMNQ96JQ2 1002 aa15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 KIFC3Q9BVG8 833 aa15.52■□□□□ 0.08
SFSWAP-201ENST00000261674 RPTORQ8N122 1335 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 CCT8L1PA6NM43 557 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 RARAP10276 462 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 RPS12P25398 132 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 CHRNA3P32297 505 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 EPHX2P34913 555 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 TNFAIP1Q13829 316 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 NOP9Q86U38 636 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 OLIG1Q8TAK6 271 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 DHX38Q92620 1227 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 TLCD1Q96CP7 247 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 SGSM3Q96HU1 749 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 FIZ1Q96SL8 496 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 MKNK1Q9BUB5 465 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 TEKT3Q9BXF9 490 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 GRHL1Q9NZI5 618 aa15.52■□□□□ 0.07
SFSWAP-201ENST00000261674 CDK5RAP2Q96SN8 1893 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 NCANO14594 1321 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 SP4Q02446 784 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 PPP2R5EQ16537 467 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 C6orf118Q5T5N4 469 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 SEPT14Q6ZU15 432 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 CTNNAL1Q9UBT7 734 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 ODF2LQ9ULJ1 636 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 STK24Q9Y6E0 443 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 GSTTP1A0A1W2PQM5 241 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 NF2P35240 595 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 HMGCS2P54868 508 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 SGO2Q562F6 1265 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 CCDC50Q8IVM0 306 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 CCDC63Q8NA47 563 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 SEC14L1Q92503 715 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 PAGR1Q9BTK6 254 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 ADAM33Q9BZ11 813 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 VPS33BQ9H267 617 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 DIS3Q9Y2L1 958 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 SORBS3O60504 671 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 PPP2R5AQ15172 486 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 NUGGCQ68CJ6 796 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 LLGL2Q6P1M3 1020 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 CBWD2Q8IUF1 395 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 DAW1Q8N136 415 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 CCT6BQ92526 530 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 CXorf56Q9H5V9 222 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 TOPORSQ9NS56 1045 aaPredicted RBP15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 FGFR1OP2Q9NVK5 253 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 STK38LQ9Y2H1 464 aa15.51■□□□□ 0.07
SFSWAP-201ENST00000261674 COILP38432 576 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 PTGIRP43119 386 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 KYNUQ16719 465 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 FAM102BQ5T8I3 360 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 RNF207Q6ZRF8 634 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 ARHGEF2Q92974 986 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 PI4K2AQ9BTU6 479 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 WDR11Q9BZH6 1224 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 TRIM7Q9C029 511 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 NMRK2Q9NPI5 230 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 ABCF3Q9NUQ8 709 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 HSPBP1Q9NZL4 362 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 TTC7AQ9ULT0 858 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 ATXN2Q99700 1313 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 MIF4GDA9UHW6 222 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 TCP11X1B4DZS4 312 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 PODXLO00592 558 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 HP1BP3Q5SSJ5 553 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 CAPN12Q6ZSI9 719 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 INTS8Q75QN2 995 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 SLC13A5Q86YT5 568 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 XXYLT1Q8NBI6 393 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 GMCL1Q96IK5 515 aa15.5■□□□□ 0.07
SFSWAP-201ENST00000261674 ZBED3Q96IU2 234 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms