RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 WDR59Q6PJI9 974 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 MTHFD1LQ6UB35 978 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 OTOP2Q7RTS6 562 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 RPAINQ86UA6 219 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 NEK11Q8NG66 645 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 DNAJB3Q8WWF6 145 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 BAP1Q92560 729 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 JPH2Q9BR39 696 aaPredicted RBP18.98■□□□□ 0.63
SRSF1-201ENST00000258962 TMEM134Q9H6X4 195 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 USP20Q9Y2K6 914 aa18.98■□□□□ 0.63
SRSF1-201ENST00000258962 GOLGA8IPA6NC78 632 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 GOLGA8JA6NMD2 632 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 OFD1O75665 1012 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 TRIM49P0CI25 452 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 TRIM49CP0CI26 452 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 CLCN3P51790 818 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 MCCD1P59942 119 aaPredicted RBP18.97■□□□□ 0.63
SRSF1-201ENST00000258962 STRN3Q13033 797 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 MXD4Q14582 209 aaPredicted RBP18.97■□□□□ 0.63
SRSF1-201ENST00000258962 MEA1Q16626 185 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 CDCA2Q69YH5 1023 aaPredicted RBP18.97■□□□□ 0.63
SRSF1-201ENST00000258962 EFCAB12Q6NXP0 572 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 TOGARAM2Q6ZUX3 1019 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 LINC01465Q8N7H1 131 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 PLEKHO2Q8TD55 490 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 HERVK_113Q902F9 699 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 SAAL1Q96ER3 474 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 BICD1Q96G01 975 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 FBXL18Q96ME1 805 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 EDEM3Q9BZQ6 932 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 CCDC113Q9H0I3 377 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 GANQ9H2C0 597 aa18.97■□□□□ 0.63
SRSF1-201ENST00000258962 TRMT1Q9NXH9 659 aaKnown RBP18.97■□□□□ 0.63
SRSF1-201ENST00000258962 SUCLA2Q9P2R7 463 aaPredicted RBP18.97■□□□□ 0.63
SRSF1-201ENST00000258962 RANBP2P49792 3224 aaKnown RBP18.96■□□□□ 0.63
SRSF1-201ENST00000258962 GTPBP10A4D1E9 387 aaKnown RBP18.96■□□□□ 0.63
SRSF1-201ENST00000258962 ZBBXA8MT70 800 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 K7ERI5 159 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 M0QZ92 97 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 MAGEB2O15479 319 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 SLC9A1P19634 815 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 GARTP22102 1010 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 FMO5P49326 533 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 DLG4P78352 724 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 C1orf220Q5T0J3 134 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 INTS8Q75QN2 995 aaKnown RBP18.96■□□□□ 0.63
SRSF1-201ENST00000258962 CBWD2Q8IUF1 395 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 TMTC1Q8IUR5 882 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 NME8Q8N427 588 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 PPP1R13BQ96KQ4 1090 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 CHP1Q99653 195 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 CEP72Q9P209 647 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 STYXL1Q9Y6J8 313 aa18.96■□□□□ 0.63
SRSF1-201ENST00000258962 SMIM35A0A1B0GVV1 85 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 NBNO60934 754 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 KRT13P13646 458 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 PON1P27169 355 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 LIG4P49917 911 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 VAMP7P51809 220 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 SNRNP35Q16560 246 aaKnown RBP18.95■□□□□ 0.62
SRSF1-201ENST00000258962 EXOC3L4Q17RC7 722 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 CBWD6Q4V339 395 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 CBWD3Q5JTY5 395 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 CBWD5Q5RIA9 395 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 TRAF7Q6Q0C0 670 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 CYP26C1Q6V0L0 522 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 METTL13Q8N6R0 699 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 RNF149Q8NC42 400 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 ZNF397Q8NF99 534 aaPredicted RBP18.95■□□□□ 0.62
SRSF1-201ENST00000258962 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 HAPLN2Q9GZV7 340 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 SIX2Q9NPC8 291 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 CCP110O43303 1012 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 CXCL10P02778 98 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 SRGAP2CP0DJJ0 459 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 HNRNPH3P31942 346 aaKnown RBP18.95■□□□□ 0.62
SRSF1-201ENST00000258962 EFNA5P52803 228 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 FAM26DQ5JW98 314 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 PDXDC1Q6P996 788 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 GBP6Q6ZN66 633 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 RHPN2Q8IUC4 686 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 VWCEQ96DN2 955 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 DESI2Q9BSY9 194 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 TARS2Q9BW92 718 aaKnown RBP18.95■□□□□ 0.62
SRSF1-201ENST00000258962 PLCB1Q9NQ66 1216 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 PPP2R2CQ9Y2T4 447 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 SLC4A7Q9Y6M7 1214 aa18.95■□□□□ 0.62
SRSF1-201ENST00000258962 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.94■□□□□ 0.62
SRSF1-201ENST00000258962 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.94■□□□□ 0.62
SRSF1-201ENST00000258962 LRRC53A6NM62 1247 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 TTLL13PA6NNM8 815 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 TMOD1P28289 359 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 POLR2FP61218 127 aaKnown RBP18.94■□□□□ 0.62
SRSF1-201ENST00000258962 MRPS6P82932 125 aaKnown RBP18.94■□□□□ 0.62
SRSF1-201ENST00000258962 GPNMBQ14956 572 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 CNKSR3Q6P9H4 555 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 REXO1L1PQ8IX06 675 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 GPD1LQ8N335 351 aa18.94■□□□□ 0.62
SRSF1-201ENST00000258962 ZBTB45Q96K62 511 aaPredicted RBP18.94■□□□□ 0.62
SRSF1-201ENST00000258962 NLRC4Q9NPP4 1024 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms