RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 KRT39Q6A163 491 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 LBX2Q6XYB7 198 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 RNF10Q8N5U6 811 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 RNF149Q8NC42 400 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 PARD3BQ8TEW8 1205 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 CPA5Q8WXQ8 436 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 PORCNQ9H237 461 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 AMACRQ9UHK6 382 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 FAM153AQ9UHL3 310 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 A0A087WUV0 522 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 SPATA31C2B4DYI2 1134 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 NDUFAB1O14561 156 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 FGGP02679 453 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 OATP04181 439 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 CCDC125Q86Z20 511 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 AENQ8WTP8 325 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 PRPF31Q8WWY3 499 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 CDHR1Q96JP9 859 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 KREMEN1Q96MU8 473 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 SPATA33Q96N06 139 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 NT5C1BQ96P26 610 aa15.75■□□□□ 0.11
TRAFD1-201ENST00000257604 ZNF646O15015 1829 aaPredicted RBP15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 EPHX2P34913 555 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 PIK3CAP42336 1068 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 TTMPQ5BVD1 217 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 NOP9Q86U38 636 aaKnown RBP15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 MCPH1Q8NEM0 835 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 GPR88Q9GZN0 384 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 RAB20Q9NX57 234 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 AMFRQ9UKV5 643 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 AGO2Q9UKV8 859 aaKnown RBP15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 KRT19P08727 400 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 FDX1P10109 184 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 MARCKSL1P49006 195 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 CLCN3P51790 818 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 MEI1Q5TIA1 1274 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 FBXL13Q8NEE6 735 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 SLC10A4Q96EP9 437 aa15.74■□□□□ 0.11
TRAFD1-201ENST00000257604 SPOPO43791 374 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 GLRA2P23416 452 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 TNFSF9P41273 254 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 PPFIA1Q13136 1202 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 GPD1LQ8N335 351 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 ZNF653Q96CK0 615 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 IWS1Q96ST2 819 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 PCDHB18PQ96TA0 734 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 USTQ9Y2C2 406 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 GJB6O95452 261 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 CCDC172P0C7W6 258 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 TXNP10599 105 aaKnown RBP15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 MAPTP10636 758 aaKnown RBP15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 ORC1Q13415 861 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 ANKRD13AQ8IZ07 590 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 OR2W6PQ8NHA6 318 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 RBAKQ9NYW8 714 aaPredicted RBP15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 STIM2Q9P246 746 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 NR2E1Q9Y466 385 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 GRIN2DO15399 1336 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 EIF3HO15372 352 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 RAD51CO43502 376 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 MUTP22033 750 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 NCKAP1LP55160 1127 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 TFAMQ00059 246 aaKnown RBP15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 TMEM62Q0P6H9 643 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 TAS1R3Q7RTX0 852 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 MAP4K3Q8IVH8 894 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 MMP19Q99542 508 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 FAM118BQ9BPY3 351 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 COG5Q9UP83 839 aa15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
TRAFD1-201ENST00000257604 IFI16Q16666 785 aaKnown RBP15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 FOXR2Q6PJQ5 311 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 TMEM270Q6UE05 265 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 LMO3Q8TAP4 145 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 RPGRIP1Q96KN7 1286 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 TRIM7Q9C029 511 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 C1orf112Q9NSG2 853 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 MAP3K20Q9NYL2 800 aaKnown RBP15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 SSC5DA1L4H1 1573 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 GSTTP1A0A1W2PQM5 241 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 SHOX2O60902 331 aaPredicted RBP15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 MFAP3P55082 362 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 WDR44Q5JSH3 913 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 ERO1BQ86YB8 467 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 CEP120Q8N960 986 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 ZIM3Q96PE6 472 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 STRA6Q9BX79 667 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 PTPN22Q9Y2R2 807 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 LTBP3Q9NS15 1303 aa15.72■□□□□ 0.11
TRAFD1-201ENST00000257604 EDN1P05305 212 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 PDE6CP51160 858 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 CYP24A1Q07973 514 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 CHST13Q8NET6 341 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 UHMK1Q8TAS1 419 aaKnown RBP15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 KRT35Q92764 455 aa15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 PPANQ9NQ55 473 aaKnown RBP15.71■□□□□ 0.11
TRAFD1-201ENST00000257604 SYNGAP1Q96PV0 1343 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms