RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 PRELID1Q9Y255 219 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 CLIC4Q9Y696 253 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 NUMBLQ9Y6R0 609 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 CCL15-CCL14A0A0B4J2E2 113 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 TTC34A8MYJ7 566 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CXCL11O14625 94 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 STAM2O75886 525 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 HEXIM1O94992 359 aaKnown RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 GH2P01242 217 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 MMP13P45452 471 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CARSP49589 748 aaKnown RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 GUCY1B3Q02153 619 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 KIF22Q14807 665 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 SPCS2Q15005 226 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ALX1Q15699 326 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CCL15Q16663 113 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ABCB5Q2M3G0 1257 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 IL23RQ5VWK5 629 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 Q6ZNX1 250 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 TRIM50Q86XT4 487 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 LRRC8CQ8TDW0 803 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 BRI3BPQ8WY22 251 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ABTB1Q969K4 478 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 DGCR14Q96DF8 476 aaKnown RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ZNF274Q96GC6 653 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 PTPN18Q99952 460 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 EURLQ9NYK6 297 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 FBXO9Q9UK97 447 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 NOVA2Q9UNW9 492 aaKnown RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CASP8AP2Q9UKL3 1982 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 GREB1LQ9C091 1923 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 TBKBP1A7MCY6 615 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 A8MUI8 341 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 BHMG1C9JSJ3 638 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 E9PBE3 544 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ZNF185O15231 689 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 FOXN1O15353 648 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 LCA5LO95447 670 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 EYA4O95677 639 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 FGAP02671 866 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 LYNP07948 512 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 FAM153BP0C7A2 387 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CETPP11597 493 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 MYCLP1P12525 358 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 BMP6P22004 513 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CTNNA1P35221 906 aaKnown RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 AP1B1Q10567 949 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 NONOQ15233 471 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 FAM153CQ494X1 144 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 B3GNT6Q6ZMB0 384 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 NLRP9Q7RTR0 991 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 NELFCDQ8IXH7 590 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ZBED8Q8IZ13 594 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 BBS5Q8N3I7 341 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 FBXL16Q8N461 479 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 CPLX3Q8WVH0 158 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 SKA1Q96BD8 255 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 EFHD2Q96C19 240 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 GRAMD1AQ96CP6 724 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 PGM2Q96G03 612 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 NUP88Q99567 741 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ELAC2Q9BQ52 826 aaKnown RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 HGH1Q9BTY7 390 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ASCC2Q9H1I8 757 aaPredicted RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 METTL14Q9HCE5 456 aaKnown RBP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 EPB41L5Q9HCM4 733 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCNA1-201ENST00000255465 AIPL1Q9NZN9 384 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 FAM153AQ9UHL3 310 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 ZNHIT2Q9UHR6 403 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 TIMM22Q9Y584 194 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 LOC285556D6RIA3 1793 aa12.63□□□□□ -0.39
CCNA1-201ENST00000255465 A0A1W2PQC6 194 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 CES2O00748 559 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
CCNA1-201ENST00000255465 CA12O43570 354 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 NDUFB5O43674 189 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
CCNA1-201ENST00000255465 TRPA1O75762 1119 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 GSTT2P0CG29 244 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 GSTT2BP0CG30 244 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 ENDOUP21128 410 aaKnown RBP12.62□□□□□ -0.39
CCNA1-201ENST00000255465 SERPINB3P29508 390 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 MAGOHP61326 146 aaKnown RBP12.62□□□□□ -0.39
CCNA1-201ENST00000255465 TNNC1P63316 161 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 PPARAQ07869 468 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 SPP2Q13103 211 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 ARHGEF6Q15052 776 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 HSP90AA5PQ58FG0 334 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 PHLDB3Q6NSJ2 640 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 BPHLQ86WA6 291 aaPredicted RBP12.62□□□□□ -0.39
CCNA1-201ENST00000255465 LRRC34Q8IZ02 419 aa12.62□□□□□ -0.39
CCNA1-201ENST00000255465 SPATA20Q8TB22 786 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms