RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SYNCQ9H7C4 482 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 DBR1Q9UK59 544 aaKnown RBP12.57□□□□□ -0.4
LIN28A-201ENST00000254231 MEIS3P2A8K0S8 358 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 PPP1R2P41236 205 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 MYL6P60660 151 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 GRB14Q14449 540 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 KCNA10Q16322 511 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 B3GNT9Q6UX72 402 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 TAS1R3Q7RTX0 852 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 MRPL4Q9BYD3 311 aaKnown RBP12.57□□□□□ -0.4
LIN28A-201ENST00000254231 C1orf112Q9NSG2 853 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 TLL2Q9Y6L7 1015 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 CITO14578 2027 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 RGPD3A6NKT7 1758 aaPredicted RBP12.57□□□□□ -0.4
LIN28A-201ENST00000254231 RGPD4Q7Z3J3 1758 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 ZMYM2Q9UBW7 1377 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 LRRIQ3A6PVS8 624 aaPredicted RBP12.57□□□□□ -0.4
LIN28A-201ENST00000254231 SGPL1O95470 568 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 GNA14O95837 355 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 C17orf99Q6UX52 265 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF296Q8WUU4 475 aaPredicted RBP12.57□□□□□ -0.4
LIN28A-201ENST00000254231 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 LPIN3Q9BQK8 851 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 OSBPL7Q9BZF2 842 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 RPF1Q9H9Y2 349 aaKnown RBP12.57□□□□□ -0.4
LIN28A-201ENST00000254231 TAS2R14Q9NYV8 317 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 CTTNBP2NLQ9P2B4 639 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 SEL1LQ9UBV2 794 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 CAPN11Q9UMQ6 739 aa12.57□□□□□ -0.4
LIN28A-201ENST00000254231 GRAP2O75791 330 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 ITGB3P05106 788 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 MAPTP10636 758 aaKnown RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 MTM1Q13496 603 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 TFDP1Q14186 410 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 HS1BP3Q53T59 392 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 INTS8Q75QN2 995 aaKnown RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 FAM118BQ9BPY3 351 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 HAPLN2Q9GZV7 340 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 TRPV6Q9H1D0 765 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 MYH9P35579 1960 aaKnown RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 COL11A1P12107 1806 aaPredicted RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 SLC15A5A6NIM6 579 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 M0QZ92 97 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 GPR25O00155 361 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 POMCP01189 267 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 ARF4P18085 180 aaPredicted RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 PHKA2P46019 1235 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 CCDC181Q5TID7 509 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 KLHDC7AQ5VTJ3 777 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 ALKBH5Q6P6C2 394 aaKnown RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 CEP57Q86XR8 500 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 ELOA2Q8IYF1 753 aaPredicted RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 NT5C1BQ96P26 610 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 EIF2AQ9BY44 585 aaKnown RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 NXF3Q9H4D5 531 aaKnown RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 DHX33Q9H6R0 707 aaKnown RBP12.56□□□□□ -0.4
LIN28A-201ENST00000254231 VTA1Q9NP79 307 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 FAM49BQ9NUQ9 324 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 POLIQ9UNA4 740 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 AGAP1Q9UPQ3 857 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 TRAF3IP3Q9Y228 551 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 PTPRJQ12913 1337 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 STAM2O75886 525 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 FAM193AP78312 1265 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 MESDQ14696 234 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 EDRF1Q3B7T1 1238 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 CCDC33Q8N5R6 958 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 PARD3BQ8TEW8 1205 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 FAM167AQ96KS9 214 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
LIN28A-201ENST00000254231 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 THAP12O43422 761 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 HCRTO43612 131 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 YARSP54577 528 aaKnown RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 ETF1P62495 437 aaKnown RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 SPOUT1Q5T280 376 aaKnown RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 IER5Q5VY09 327 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 FRMD5Q7Z6J6 570 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 VPS36Q86VN1 386 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 ACSF2Q96CM8 615 aaPredicted RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 TRIM31Q9BZY9 425 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 RAB20Q9NX57 234 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 SIK3Q9Y2K2 1263 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 PCDHA13Q9Y5I0 950 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 NT5C1B-RDH14C9J2C7 533 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 SCAMP3O14828 347 aaKnown RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 KRT86O43790 486 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 ZNF500O60304 480 aaPredicted RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 MAFO75444 373 aaPredicted RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 EDNRBP24530 442 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 AFF1P51825 1210 aaKnown RBP12.55□□□□□ -0.4
LIN28A-201ENST00000254231 ELF2Q15723 593 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 KRT39Q6A163 491 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 MTHFD1LQ6UB35 978 aa12.55□□□□□ -0.4
LIN28A-201ENST00000254231 EP400NLQ6ZTU2 488 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms