RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 POP1Q99575 1024 aaKnown RBP23.58■■□□□ 1.37
RNF39-201ENST00000244360 TOPORSQ9NS56 1045 aaPredicted RBP23.58■■□□□ 1.37
RNF39-201ENST00000244360 RAB20Q9NX57 234 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 PLAAQ9Y263 795 aa23.58■■□□□ 1.37
RNF39-201ENST00000244360 MIF4GDA9UHW6 222 aaKnown RBP23.57■■□□□ 1.36
RNF39-201ENST00000244360 CYP26A1O43174 497 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 FGGP02679 453 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 USP8P40818 1118 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 FMO1Q01740 532 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.57■■□□□ 1.36
RNF39-201ENST00000244360 CCDC26Q8TAB7 109 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 IFT74Q96LB3 600 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 RNPC3Q96LT9 517 aaKnown RBP23.57■■□□□ 1.36
RNF39-201ENST00000244360 POLR3FQ9H1D9 316 aaPredicted RBP23.57■■□□□ 1.36
RNF39-201ENST00000244360 CTTNBP2NLQ9P2B4 639 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 HNRNPDLO14979 420 aaKnown RBP23.57■■□□□ 1.36
RNF39-201ENST00000244360 MAATS1Q7Z4T9 603 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 SLC47A2Q86VL8 602 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 DNERQ8NFT8 737 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 NAP1L3Q99457 506 aaPredicted RBP23.57■■□□□ 1.36
RNF39-201ENST00000244360 PAGR1Q9BTK6 254 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 EPN3Q9H201 632 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 TMBIM4Q9HC24 238 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 ALG6Q9Y672 507 aa23.57■■□□□ 1.36
RNF39-201ENST00000244360 ATG7O95352 703 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 SV2AQ7L0J3 742 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 CHST13Q8NET6 341 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 ALG3Q92685 438 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 RPS6KC1Q96S38 1066 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 KCNG1Q9UIX4 513 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 SCP2P22307 547 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 LSP1P33241 339 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 ATP1A2P50993 1020 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 PTENP60484 403 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 PPP2R5EQ16537 467 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 CEP85LQ5SZL2 805 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 C15orf39Q6ZRI6 1047 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 MICALCLQ6ZW33 695 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 AMACRQ9UHK6 382 aa23.56■■□□□ 1.36
RNF39-201ENST00000244360 MAFBQ9Y5Q3 323 aaPredicted RBP23.56■■□□□ 1.36
RNF39-201ENST00000244360 ZC3H11AO75152 810 aaKnown RBP eCLIP23.55■■□□□ 1.36
RNF39-201ENST00000244360 CYP11B1P15538 503 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 CLDN10P78369 228 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 CDR2Q01850 454 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 SP2Q02086 613 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 SP4Q02446 784 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 EMC2Q15006 297 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 SKIDA1Q1XH10 827 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 RUFY4Q6ZNE9 571 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 MORC4Q8TE76 937 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 STYXL1Q9Y6J8 313 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 CYP1A2P05177 515 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 MYZAPP0CAP1 466 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 HSD17B3P37058 310 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 GCNT1Q02742 428 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 BIRC3Q13489 604 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 STXBP2Q15833 593 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 TTC19Q6DKK2 380 aaPredicted RBP23.55■■□□□ 1.36
RNF39-201ENST00000244360 PACS2Q86VP3 889 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 DDX1Q92499 740 aaKnown RBP23.55■■□□□ 1.36
RNF39-201ENST00000244360 KIAA1586Q9HCI6 787 aa23.55■■□□□ 1.36
RNF39-201ENST00000244360 MMEP08473 750 aa23.54■■□□□ 1.36
RNF39-201ENST00000244360 ATP4AP20648 1035 aa23.54■■□□□ 1.36
RNF39-201ENST00000244360 MDH1P40925 334 aaKnown RBP23.54■■□□□ 1.36
RNF39-201ENST00000244360 HIRAP54198 1017 aaPredicted RBP23.54■■□□□ 1.36
RNF39-201ENST00000244360 ENOSF1Q7L5Y1 443 aa23.54■■□□□ 1.36
RNF39-201ENST00000244360 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.54■■□□□ 1.36
RNF39-201ENST00000244360 NR2E1Q9Y466 385 aa23.54■■□□□ 1.36
RNF39-201ENST00000244360 SYNGAP1Q96PV0 1343 aa23.54■■□□□ 1.36
RNF39-201ENST00000244360 A0A0G2JMZ2 1700 aa23.54■■□□□ 1.36
RNF39-201ENST00000244360 ANKRD65E5RJM6 399 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 EXTL3O43909 919 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 MTERF2Q49AM1 385 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 ZNF526Q8TF50 670 aaPredicted RBP23.53■■□□□ 1.36
RNF39-201ENST00000244360 ZSWIM1Q9BR11 485 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 ACP6Q9NPH0 428 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 FAM114A2Q9NRY5 505 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 GTF3C4Q9UKN8 822 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 TTI1O43156 1089 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 ERLIN2O94905 339 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 OATP04181 439 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 PDE6CP51160 858 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 UBL4BQ8N7F7 174 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 CD101Q93033 1021 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 BICD1Q96G01 975 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 FAM81BQ96LP2 452 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 FAM213AQ9BRX8 229 aa23.53■■□□□ 1.36
RNF39-201ENST00000244360 DHX33Q9H6R0 707 aaKnown RBP23.53■■□□□ 1.36
RNF39-201ENST00000244360 SIP14410 1827 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 IGKV6D-21A0A0A0MT36 114 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 KIAA0391O15091 583 aaKnown RBP23.52■■□□□ 1.36
RNF39-201ENST00000244360 PIGRP01833 764 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 DLATP10515 647 aaKnown RBP23.52■■□□□ 1.36
RNF39-201ENST00000244360 PSMD6Q15008 389 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 PTGISQ16647 500 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 DDX42Q86XP3 938 aaKnown RBP eCLIP23.52■■□□□ 1.36
RNF39-201ENST00000244360 MICALL1Q8N3F8 863 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 TATDN2Q93075 761 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 NEUROG2Q9H2A3 272 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 ZNF302Q9NR11 478 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms