RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CLMNQ96JQ2 1002 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 SASH1O94885 1247 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 HSD17B4P51659 736 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 SH3TC2Q8TF17 1288 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ASCC2Q9H1I8 757 aaPredicted RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 LSM7Q9UK45 103 aaKnown RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 HIST1H2AGP0C0S8 130 aaPredicted RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 HIST1H2ADP20671 130 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ZBED8Q8IZ13 594 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 EAF2Q96CJ1 260 aaPredicted RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 ERLEC1Q96DZ1 483 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 HIST1H2AHQ96KK5 128 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 HIST1H2AJQ99878 128 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 H2AFJQ9BTM1 129 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 TFRCP02786 760 aaKnown RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 S100A5P33763 92 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 SHROOM1Q2M3G4 852 aaPredicted RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 PABPC5Q96DU9 382 aaKnown RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 TDRD3Q9H7E2 651 aaKnown RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 RBAKQ9NYW8 714 aaPredicted RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 PRG3Q9Y2Y8 225 aaPredicted RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 PPP6R2O75170 966 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 NDUFA10O95299 355 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ALCAMQ13740 583 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ITPRIPL1Q6GPH6 555 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 GPT2Q8TD30 523 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ELMO2Q96JJ3 720 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 CHAMP1Q96JM3 812 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 KRT84Q9NSB2 600 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 CRKP46108 304 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ETF1P62495 437 aaKnown RBP13.93□□□□□ -0.18
NEK9-201ENST00000238616 TRIM32Q13049 653 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 ZNF280CQ8ND82 737 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 SCFD1Q8WVM8 642 aa13.93□□□□□ -0.18
NEK9-201ENST00000238616 POLR1AO95602 1720 aaPredicted RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 BRIP1Q9BX63 1249 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 TLR7Q9NYK1 1049 aaKnown RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 ERAP2Q6P179 960 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 ANKMY2Q8IV38 441 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 ZFYVE1Q9HBF4 777 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 MAP3K13O43283 966 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 HOXB7P09629 217 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 ETFBP38117 255 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 VAMP7P51809 220 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 GPSM2P81274 684 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 ZNF211Q13398 564 aaPredicted RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 RARS2Q5T160 578 aaKnown RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 ADAM33Q9BZ11 813 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 MYOM2P54296 1465 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 TCN1P20061 433 aaPredicted RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 BTKQ06187 659 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 MGAT5BQ3V5L5 792 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 APOA5Q6Q788 366 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 DNAJC12Q9UKB3 198 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 POTEMA6NI47 508 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 WEE1P30291 646 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 DPYDQ12882 1025 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 PDIA2Q13087 525 aaKnown RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 COMMD2Q86X83 199 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 NDST4Q9H3R1 872 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 MKL2Q9ULH7 1088 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 APOBEC3FQ8IUX4 373 aaKnown RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 ECE2O60344 883 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 PCCAP05165 728 aaPredicted RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 PRELPP51888 382 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 MAGOHP61326 146 aaKnown RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 CDK17Q00537 523 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 TRAF7Q6Q0C0 670 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 PID1Q7Z2X4 250 aa13.92□□□□□ -0.18
NEK9-201ENST00000238616 ZNF589Q86UQ0 364 aaPredicted RBP13.92□□□□□ -0.18
NEK9-201ENST00000238616 NCKAP1LP55160 1127 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 SLC44A2Q8IWA5 706 aaPredicted RBP13.91□□□□□ -0.18
NEK9-201ENST00000238616 KRT78Q8N1N4 520 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 STKLD1Q8NE28 680 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 PCDHB6Q9Y5E3 794 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 ENO1P06733 434 aaKnown RBP13.91□□□□□ -0.18
NEK9-201ENST00000238616 OR1G1P47890 313 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 GPC5P78333 572 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 PTRHD1Q6GMV3 140 aaKnown RBP13.91□□□□□ -0.18
NEK9-201ENST00000238616 ZNF564Q8TBZ8 553 aaPredicted RBP13.91□□□□□ -0.18
NEK9-201ENST00000238616 BBS2Q9BXC9 721 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L15C9J2P7 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L13C9JLJ4 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L11C9JVI0 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L18D6R9N7 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L22D6RA61 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L17D6RBQ6 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L19D6RCP7 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L20D6RJB6 530 aa13.91□□□□□ -0.18
NEK9-201ENST00000238616 MZF1P28698 734 aaPredicted RBP13.91□□□□□ -0.18
NEK9-201ENST00000238616 EIF3BP55884 814 aaKnown RBP13.91□□□□□ -0.18
NEK9-201ENST00000238616 USP17L24Q0WX57 530 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms