RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 HECW2Q9P2P5 1572 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 DFFAO00273 331 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 KCNN4O15554 427 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 GALCP54803 685 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 HAUS6Q7Z4H7 955 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 THEM5Q8N1Q8 247 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 BEST2Q8NFU1 509 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 SNX5Q9Y5X3 404 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 PFASO15067 1338 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 PSMC5P62195 406 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 USP49Q70CQ1 688 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 CDKL3Q8IVW4 592 aaPredicted RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 TTC30BQ8N4P2 665 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 IGDCC4Q8TDY8 1250 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 FAM84BQ96KN1 310 aaPredicted RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 ISCA1Q9BUE6 129 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 ITIH6Q6UXX5 1313 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 ORC4O43929 436 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 CYP19A1P11511 503 aaPredicted RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 TWF2Q6IBS0 349 aaKnown RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 FAM8A1Q9UBU6 413 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 E2F8A0AVK6 867 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 NEMP1O14524 444 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 RPS6KA4O75676 772 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 NSUN6Q8TEA1 469 aaKnown RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 KIFC3Q9BVG8 833 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 MRPL4Q9BYD3 311 aaKnown RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 ARL2BPQ9Y2Y0 163 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 TAF6LQ9Y6J9 622 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 UBA6A0AVT1 1052 aaPredicted RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 HNRNPCL2B2RXH8 293 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 HNRNPCL1O60812 293 aaKnown RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 YWHABP31946 246 aaKnown RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 PPARGP37231 505 aaPredicted RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 KRT33BQ14525 404 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 CYTH1Q15438 398 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 CATSPER3Q86XQ3 398 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 FAM167AQ96KS9 214 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 WRNIP1Q96S55 665 aa14.15□□□□□ -0.14
NEK4-201ENST00000233027 CELF4Q9BZC1 486 aaKnown RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
NEK4-201ENST00000233027 ASAP2O43150 1006 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 EYA4O95677 639 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 AGTP01019 485 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 SFNP31947 248 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 MXD4Q14582 209 aaPredicted RBP14.14□□□□□ -0.15
NEK4-201ENST00000233027 STAT4Q14765 748 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 ATL2Q8NHH9 583 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 GRAMD1AQ96CP6 724 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 SEC16BQ96JE7 1060 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 ZIM3Q96PE6 472 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 REEP2Q9BRK0 252 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 MARCOQ9UEW3 520 aaPredicted RBP14.14□□□□□ -0.15
NEK4-201ENST00000233027 AFF4Q9UHB7 1163 aaKnown RBP14.14□□□□□ -0.15
NEK4-201ENST00000233027 FHOD1Q9Y613 1164 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 ARHGEF40Q8TER5 1519 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 E5RI56 91 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
NEK4-201ENST00000233027 RANBP1P43487 201 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 ATXN3P54252 364 aaPredicted RBP14.14□□□□□ -0.15
NEK4-201ENST00000233027 SIK2Q9H0K1 926 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 HSPBP1Q9NZL4 362 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 SYNDIG1LA6NDD5 238 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 CCDC22O60826 627 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 GYPCP04921 128 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 USP11P51784 963 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 DAB2P98082 770 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 HIC1Q14526 733 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 LBRQ14739 615 aaKnown RBP14.14□□□□□ -0.15
NEK4-201ENST00000233027 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEK4-201ENST00000233027 KIF2BQ8N4N8 673 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 AFG1LQ8WV93 481 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 RUBCNQ92622 972 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 CLMNQ96JQ2 1002 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 APEX2Q9UBZ4 518 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 PNPLA7Q6ZV29 1317 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 AARSP49588 968 aaKnown RBP eCLIP14.14□□□□□ -0.15
NEK4-201ENST00000233027 NT5C2P49902 561 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 STK4Q13043 487 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 IL25Q9H293 177 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 AURKCQ9UQB9 309 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 MYMKA6NI61 221 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 PDXKO00764 312 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 SESN2P58004 480 aaPredicted RBP14.14□□□□□ -0.15
NEK4-201ENST00000233027 SMIM5Q71RC9 77 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 C9orf72Q96LT7 481 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 UNC45AQ9H3U1 944 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 GOLPH3Q9H4A6 298 aa14.14□□□□□ -0.15
NEK4-201ENST00000233027 CCDC78A2IDD5 438 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 A8MXQ7 604 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 EFHC2Q5JST6 749 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 PGBD4Q96DM1 585 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 VIPAS39Q9H9C1 493 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 TOPORSQ9NS56 1045 aaPredicted RBP14.13□□□□□ -0.15
NEK4-201ENST00000233027 ABCC3O15438 1527 aa14.13□□□□□ -0.15
NEK4-201ENST00000233027 RASSF10A6NK89 507 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms