RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 LIMCH1Q9UPQ0 1083 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 PRKAB1Q9Y478 270 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 PCDHA10Q9Y5I2 948 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 TRPV2Q9Y5S1 764 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 CHMP2AO43633 222 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 PF4P02776 101 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 HOXC8P31273 242 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 WDR5P61964 334 aaKnown RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 MRPS6P82932 125 aaKnown RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 ITGB3BPQ13352 177 aaPredicted RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 SQSTM1Q13501 440 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 PLCB4Q15147 1175 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 TRIM71Q2Q1W2 868 aaKnown RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 NEK8Q86SG6 692 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 RPAINQ86UA6 219 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 MYOCDQ8IZQ8 938 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 NME8Q8N427 588 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 USP38Q8NB14 1042 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 SLC17A8Q8NDX2 589 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 PHC3Q8NDX5 983 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 MAFAQ8NHW3 353 aaPredicted RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 MYLIPQ8WY64 445 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 RIT2Q99578 217 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 CDX2Q99626 313 aaPredicted RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 JPH2Q9BR39 696 aaPredicted RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 SRRTQ9BXP5 876 aaKnown RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 IFIH1Q9BYX4 1025 aaKnown RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 DDX25Q9UHL0 483 aaKnown RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 TPCN1Q9ULQ1 816 aa6.35□□□□□ -1.39
AFP-201ENST00000226359 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
AFP-201ENST00000226359 BAZ2BQ9UIF8 2168 aaKnown RBP6.34□□□□□ -1.39
AFP-201ENST00000226359 KIAA1217Q5T5P2 1943 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 GRXCR1A8MXD5 290 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 FAM86B1E9PN63 330 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 MAGEB2O15479 319 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 FAM86B2P0C5J1 330 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 INSRRP14616 1297 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 PWP1Q13610 501 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 INF2Q27J81 1249 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 LETM2Q2VYF4 491 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 Q4G0T1 1027 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 SWSAP1Q6NVH7 229 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 ABHD15Q6UXT9 468 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 CYP2W1Q8TAV3 490 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 IL17RAQ96F46 866 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 SAMD11Q96NU1 681 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 YME1L1Q96TA2 773 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 RAD9AQ99638 391 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 FTHL17Q9BXU8 183 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 DISC1Q9NRI5 854 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 MSRB2Q9Y3D2 182 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 PCDHA2Q9Y5H9 948 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 CDY2AQ9Y6F7 541 aa6.34□□□□□ -1.39
AFP-201ENST00000226359 IGLV3-22A0A075B6J6 115 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 SMIM35A0A1B0GVV1 85 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 A0A1W2PP55 124 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 MBLAC1A4D2B0 266 aaPredicted RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 CCNT1O60563 726 aaKnown RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 GREM1O60565 184 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 NBNO60934 754 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 SASH3O75995 380 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 CA3P07451 260 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 PDGFRBP09619 1106 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 STAG3L1P0CL83 205 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 GHRP10912 638 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 TARSP26639 723 aaKnown RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 MASP1P48740 699 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 DNM2P50570 870 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 RABGGTBP53611 331 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 PRKCEQ02156 737 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 SEPT6Q14141 434 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 PIK3AP1Q6ZUJ8 805 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 KIAA0907Q7Z7F0 614 aaPredicted RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 FMNL3Q8IVF7 1028 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 CCDC60Q8IWA6 550 aaPredicted RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 EXOC8Q8IYI6 725 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 SLFN12Q8IYM2 578 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 VWA5B2Q8N398 1253 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 METTL13Q8N6R0 699 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 GOLM1Q8NBJ4 401 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 DBF4BQ8NFT6 615 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 DNAJB3Q8WWF6 145 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 C8orf76Q96K31 380 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 FAM20AQ96MK3 541 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 GUCD1Q96NT3 240 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 LLPHQ9BRT6 129 aaKnown RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 PHF20Q9BVI0 1012 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 OXCT2Q9BYC2 517 aaPredicted RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 BCAS3Q9H6U6 928 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 KANSL3Q9P2N6 904 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 NOL7Q9UMY1 257 aaKnown RBP6.33□□□□□ -1.4
AFP-201ENST00000226359 KCNJ14Q9UNX9 436 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 INSL6Q9Y581 213 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 SQORQ9Y6N5 450 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 BRCA2P51587 3418 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 CYP3A7-CYP3A51PA0A087WV96 503 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 TBX3O15119 743 aa6.33□□□□□ -1.4
AFP-201ENST00000226359 MSH4O15457 936 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms