RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 PICK1Q9NRD5 415 aa22.6■■□□□ 1.21
CCDC130-201ENST00000221554 PCDHA3Q9Y5H8 950 aa22.6■■□□□ 1.21
CCDC130-201ENST00000221554 LSP1P33241 339 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 CCT5P48643 541 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 MESDQ14696 234 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 CYP1B1Q16678 543 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 MICALCLQ6ZW33 695 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 ZNF564Q8TBZ8 553 aaPredicted RBP22.59■■□□□ 1.21
CCDC130-201ENST00000221554 SEMA4DQ92854 862 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 CD101Q93033 1021 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 CCDC127Q96BQ5 260 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 ATG4CQ96DT6 458 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 TXLNGYQ9BZA5 131 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 CELF4Q9BZC1 486 aaKnown RBP22.59■■□□□ 1.21
CCDC130-201ENST00000221554 ATP6V0A4Q9HBG4 840 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 TRPC6Q9Y210 931 aa22.59■■□□□ 1.21
CCDC130-201ENST00000221554 NDUFAB1O14561 156 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 MYBL1P10243 752 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 KCNA2P16389 499 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 DSG3P32926 999 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 PDCLQ13371 301 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 MIS18BP1Q6P0N0 1132 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 HOOK3Q86VS8 718 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 JAMLQ86YT9 394 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 REPS2Q8NFH8 660 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 MAIP1Q8WWC4 291 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 PAGR1Q9BTK6 254 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 DPH5Q9H2P9 285 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 MTRF1LQ9UGC7 380 aaKnown RBP22.58■■□□□ 1.21
CCDC130-201ENST00000221554 LCMT1Q9UIC8 334 aa22.58■■□□□ 1.21
CCDC130-201ENST00000221554 TMEM150BA6NC51 233 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 STBD1O95210 358 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 ATP1A2P50993 1020 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 PPP1R2P3Q6NXS1 205 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 SLC47A2Q86VL8 602 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 PPM1EQ8WY54 764 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 MAGOHBQ96A72 148 aaKnown RBP22.58■■□□□ 1.2
CCDC130-201ENST00000221554 ZNF653Q96CK0 615 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 SAAL1Q96ER3 474 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 NUP85Q9BW27 656 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 JPH1Q9HDC5 661 aaPredicted RBP22.58■■□□□ 1.2
CCDC130-201ENST00000221554 SLC9A2Q9UBY0 812 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 GGA2Q9UJY4 613 aa22.58■■□□□ 1.2
CCDC130-201ENST00000221554 DICER1Q9UPY3 1922 aaKnown RBP22.57■■□□□ 1.2
CCDC130-201ENST00000221554 SPOPO43791 374 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 MMEP08473 750 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 FNTAP49354 379 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 RWDD2BP57060 319 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 ZNF211Q13398 564 aaPredicted RBP22.57■■□□□ 1.2
CCDC130-201ENST00000221554 XKR3Q5GH77 459 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 NAA35Q5VZE5 725 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 SNRNP48Q6IEG0 339 aaKnown RBP22.57■■□□□ 1.2
CCDC130-201ENST00000221554 SV2AQ7L0J3 742 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 ZSWIM2Q8NEG5 633 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 ATP8B4Q8TF62 1192 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 KAT5Q92993 513 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 SH2D3AQ9BRG2 576 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 CYP26B1Q9NR63 512 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 ZDHHC18Q9NUE0 388 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 TMOD4Q9NZQ9 345 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 NR2E1Q9Y466 385 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 DOCK1Q14185 1865 aa22.57■■□□□ 1.2
CCDC130-201ENST00000221554 A0A087WUV0 522 aaPredicted RBP22.56■■□□□ 1.2
CCDC130-201ENST00000221554 HNRNPDLO14979 420 aaKnown RBP22.56■■□□□ 1.2
CCDC130-201ENST00000221554 EXTL3O43909 919 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 NUDT17P0C025 328 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 PTGIRP43119 386 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 CLDN10P78369 228 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 IFFO1Q0D2I5 559 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 PTGISQ16647 500 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 SWSAP1Q6NVH7 229 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 C10orf67Q8IYJ2 551 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 TRIM51Q9BSJ1 452 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 CNOT10Q9H9A5 744 aaKnown RBP22.56■■□□□ 1.2
CCDC130-201ENST00000221554 AVENQ9NQS1 362 aaPredicted RBP22.56■■□□□ 1.2
CCDC130-201ENST00000221554 C1orf112Q9NSG2 853 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 ARHGAP28Q9P2N2 729 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 CNOT7Q9UIV1 285 aaKnown RBP22.56■■□□□ 1.2
CCDC130-201ENST00000221554 HACL1Q9UJ83 578 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 MYPNQ86TC9 1320 aa22.56■■□□□ 1.2
CCDC130-201ENST00000221554 MYO1FO00160 1098 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 ZNF862O60290 1169 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 SLC1A1P43005 524 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 CLEC16AQ2KHT3 1053 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 WDR44Q5JSH3 913 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 SLFN12LQ6IEE8 588 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 CYFIP1Q7L576 1253 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 SLC13A5Q86YT5 568 aaPredicted RBP22.55■■□□□ 1.2
CCDC130-201ENST00000221554 PRELID2Q8N945 189 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 C12orf50Q8NA57 414 aaPredicted RBP22.55■■□□□ 1.2
CCDC130-201ENST00000221554 DDX1Q92499 740 aaKnown RBP22.55■■□□□ 1.2
CCDC130-201ENST00000221554 BICD1Q96G01 975 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 PABPC3Q9H361 631 aaKnown RBP22.55■■□□□ 1.2
CCDC130-201ENST00000221554 ACAD9Q9H845 621 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 RIPK3Q9Y572 518 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 TMEM110-MUSTN1A8MSY1 372 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 SPATA31C2B4DYI2 1134 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 PTPRAP18433 802 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 FLT3P36888 993 aa22.55■■□□□ 1.2
CCDC130-201ENST00000221554 STRN3Q13033 797 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms