RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 APEX2Q9UBZ4 518 aa17.08■□□□□ 0.32
SF3A2-201ENST00000221494 TLDC2A0PJX2 215 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 GRIN3BO60391 1043 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 UBOX5O94941 541 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 FOSP01100 380 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-201ENST00000221494 SPATA31C1P0DKV0 1188 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 KRT13P13646 458 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 MUTP22033 750 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-201ENST00000221494 ACVR2BQ13705 512 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 RNF43Q68DV7 783 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 TBC1D1Q86TI0 1168 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-201ENST00000221494 PNMA8AQ86V59 439 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-201ENST00000221494 PROCA1Q8NCQ7 364 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-201ENST00000221494 GLG1Q92896 1179 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 SEMA4AQ9H3S1 761 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 ECT2Q9H8V3 914 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
SF3A2-201ENST00000221494 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 ATP5HO75947 161 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 MAN1A1P33908 653 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 LACTBP83111 547 aaPredicted RBP17.06■□□□□ 0.32
SF3A2-201ENST00000221494 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 DLK2Q6UY11 383 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 APLFQ8IW19 511 aaPredicted RBP17.06■□□□□ 0.32
SF3A2-201ENST00000221494 CFAP61Q8NHU2 1237 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 CHURC1Q8WUH1 139 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 ALG3Q92685 438 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 RAB3IPQ96QF0 476 aaPredicted RBP17.06■□□□□ 0.32
SF3A2-201ENST00000221494 GPR88Q9GZN0 384 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 ABCF3Q9NUQ8 709 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 ALG6Q9Y672 507 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 E7ENQ6 273 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 TGFB1I1O43294 461 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 BCRP11274 1271 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 CCNB1P14635 433 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 CASP4P49662 377 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 CAV1Q03135 178 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 PTPROQ16827 1216 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 CMPK2Q5EBM0 449 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 ASRGL1Q7L266 308 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 SLC9A9Q8IVB4 645 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 AGAP11Q8TF27 550 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 TMEM174Q8WUU8 243 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 CKAP2Q8WWK9 683 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 LPAR1Q92633 364 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 DCPSQ96C86 337 aaKnown RBP17.06■□□□□ 0.32
SF3A2-201ENST00000221494 AGPAT1Q99943 283 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 WDR18Q9BV38 432 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 INTS2Q9H0H0 1204 aaKnown RBP17.06■□□□□ 0.32
SF3A2-201ENST00000221494 DMAC2Q9NW81 257 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 PRKAG3Q9UGI9 489 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 ACTL7BQ9Y614 415 aa17.06■□□□□ 0.32
SF3A2-201ENST00000221494 GLTPD2A6NH11 291 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 P4HA2O15460 535 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 GCNT3O95395 438 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 PTPRAP18433 802 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 CIITAP33076 1130 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 COILP38432 576 aaPredicted RBP17.05■□□□□ 0.32
SF3A2-201ENST00000221494 ACCSLQ4AC99 568 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 FAM133BQ5BKY9 247 aaKnown RBP17.05■□□□□ 0.32
SF3A2-201ENST00000221494 CCDC137Q6PK04 289 aaKnown RBP17.05■□□□□ 0.32
SF3A2-201ENST00000221494 FAM160B2Q86V87 743 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 EXOC3L1Q86VI1 746 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 DYDC1Q8WWB3 177 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 KLHL29Q96CT2 875 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 TBC1D31Q96DN5 1066 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 ARHGEF26Q96DR7 871 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 FBXO28Q9NVF7 368 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 FEM1BQ9UK73 627 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 AGAP1Q9UPQ3 857 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 ZMYM2Q9UBW7 1377 aa17.05■□□□□ 0.32
SF3A2-201ENST00000221494 USP2O75604 605 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 PEX5P50542 639 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 ALDH5A1P51649 535 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 GPC5P78333 572 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 ATP11AP98196 1134 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 CALCOCO2Q13137 446 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 PABPC4Q13310 644 aaKnown RBP eCLIP17.04■□□□□ 0.327e-8■■■□□ 15.4
SF3A2-201ENST00000221494 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 GJB7Q6PEY0 223 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 HS2ST1Q7LGA3 356 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 SPATA21Q7Z572 469 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 SULF1Q8IWU6 871 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 EPS8L3Q8TE67 593 aaKnown RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 MAIP1Q8WWC4 291 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 C18orf8Q96DM3 657 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 THAP2Q9H0W7 228 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 RANBP17Q9H2T7 1088 aaKnown RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 LRRC19Q9H756 370 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 KCND2Q9NZV8 630 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 ABLIM1O14639 778 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 EPHX2P34913 555 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 MYL7Q01449 175 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms