RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 MYBPC2Q14324 1141 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 DENND2CQ68D51 928 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 SEC14L1Q92503 715 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 CYFIP2Q96F07 1278 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 HEMGNQ9BXL5 484 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 EPB41L4BQ9H329 900 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 SLC12A6Q9UHW9 1150 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 PPFIA2O75334 1257 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 NR3C2P08235 984 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 HARSP12081 509 aaKnown RBP15.69■□□□□ 0.1
CNOT3-201ENST00000221232 KCNA3P22001 575 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 SSR1P43307 286 aaKnown RBP15.69■□□□□ 0.1
CNOT3-201ENST00000221232 NCKAP1LP55160 1127 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 MTERF2Q49AM1 385 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 EIF1ADQ8N9N8 165 aaKnown RBP15.69■□□□□ 0.1
CNOT3-201ENST00000221232 FBXL13Q8NEE6 735 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 SHC3Q92529 594 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 PSMD1Q99460 953 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 GRHL1Q9NZI5 618 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 RASAL2Q9UJF2 1139 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 ANAPC7Q9UJX3 599 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 DIS3Q9Y2L1 958 aaKnown RBP15.69■□□□□ 0.1
CNOT3-201ENST00000221232 GJA3Q9Y6H8 435 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 PFASO15067 1338 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 FAM107AO95990 144 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 CFHP08603 1231 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 BIRC3Q13489 604 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 PPP1R7Q15435 360 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 EPS8L3Q8TE67 593 aaKnown RBP15.69■□□□□ 0.1
CNOT3-201ENST00000221232 TMEM143Q96AN5 459 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 PWWP2AQ96N64 755 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 EXOC7Q9UPT5 735 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 PCDHA10Q9Y5I2 948 aa15.69■□□□□ 0.1
CNOT3-201ENST00000221232 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 A6NNZ2 444 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 MIF4GDA9UHW6 222 aaKnown RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 MEFVO15553 781 aaPredicted RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 TNNI1P19237 187 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 RFX1P22670 979 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 NF2P35240 595 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 WNT7BP56706 349 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 ALCAMQ13740 583 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 TUBB8Q3ZCM7 444 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 SCARA3Q6AZY7 606 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 SNRNP48Q6IEG0 339 aaKnown RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 SLC13A5Q86YT5 568 aaPredicted RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 FMNL3Q8IVF7 1028 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 ZBTB45Q96K62 511 aaPredicted RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 MOV10L1Q9BXT6 1211 aaKnown RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 VWA5AO00534 786 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 GJB6O95452 261 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 COILP38432 576 aaPredicted RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 CIAPIN1Q6FI81 312 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 C11orf63Q6NUN7 778 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 OTUD6AQ7L8S5 288 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 CPLX4Q7Z7G2 160 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 PRUNE1Q86TP1 453 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 TMEM8AQ9HCN3 771 aa15.68■□□□□ 0.1
CNOT3-201ENST00000221232 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
CNOT3-201ENST00000221232 FAM187AA6NFU0 413 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 O00370 1275 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 P4HA2O15460 535 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 MAPTP10636 758 aaKnown RBP15.67■□□□□ 0.1
CNOT3-201ENST00000221232 MAPK4P31152 587 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 CHRNA3P32297 505 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 IFNAR2P48551 515 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 CDR2Q01850 454 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 DHX34Q14147 1143 aaKnown RBP15.67■□□□□ 0.1
CNOT3-201ENST00000221232 ZNF516Q92618 1163 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 TEPSINQ96N21 525 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 KIAA1683Q9H0B3 1180 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 PABPC3Q9H361 631 aaKnown RBP15.67■□□□□ 0.1
CNOT3-201ENST00000221232 USTQ9Y2C2 406 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 ACSL3O95573 720 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 SCP2P22307 547 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 RRM1P23921 792 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 HMGCS2P54868 508 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 CYP24A1Q07973 514 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 NIPA1Q7RTP0 329 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 C12orf56Q8IXR9 622 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
CNOT3-201ENST00000221232 WNT8AQ9H1J5 351 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 CHST7Q9NS84 486 aa15.67■□□□□ 0.1
CNOT3-201ENST00000221232 CTNND1O60716 968 aaKnown RBP15.66■□□□□ 0.1
CNOT3-201ENST00000221232 JAK3P52333 1124 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 RWDD2BP57060 319 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 KRT76Q01546 638 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 MAP4K3Q8IVH8 894 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 CCDC60Q8IWA6 550 aaPredicted RBP15.66■□□□□ 0.1
CNOT3-201ENST00000221232 AGBL3Q8NEM8 1001 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 MGARPQ8TDB4 240 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 JDP2Q8WYK2 163 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 LPAR1Q92633 364 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 IWS1Q96ST2 819 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 HERPUD2Q9BSE4 406 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 TXLNGYQ9BZA5 131 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 MTUS1Q9ULD2 1270 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 RGS16O15492 202 aaPredicted RBP15.66■□□□□ 0.1
CNOT3-201ENST00000221232 TRAPPC3O43617 180 aa15.66■□□□□ 0.1
CNOT3-201ENST00000221232 GZMAP12544 262 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms