RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 RNF207Q6ZRF8 634 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 MIGA2Q7L4E1 593 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 ZSWIM2Q8NEG5 633 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 EPS8L3Q8TE67 593 aaKnown RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 NSRP1Q9H0G5 558 aaKnown RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 TMEM8AQ9HCN3 771 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 TBC1D22BQ9NU19 505 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 SAMD15Q9P1V8 674 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 CHORDC1Q9UHD1 332 aaPredicted RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 CCPG1Q9ULG6 757 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 PTPN22Q9Y2R2 807 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 UBIAD1Q9Y5Z9 338 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 SMIM23A6NLE4 172 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 SLC16A4O15374 487 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 TBC1D12O60347 775 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 GSTA1P08263 222 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 GTF2H1P32780 548 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 MAN1A1P33908 653 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 SYDE1Q6ZW31 735 aaPredicted RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 PARP9Q8IXQ6 854 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 C4orf19Q8IY42 314 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 HELQQ8TDG4 1101 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 SEMA4DQ92854 862 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 TACO1Q9BSH4 297 aaKnown RBP14.26□□□□□ -0.13
SRP54-201ENST00000216774 PKD2L1Q9P0L9 805 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 COL20A1Q9P218 1284 aa14.26□□□□□ -0.13
SRP54-201ENST00000216774 ANKRD63C9JTQ0 380 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 PEX3P56589 373 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 PPP1R7Q15435 360 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 SNCBQ16143 134 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 ACAD10Q6JQN1 1059 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 USP37Q86T82 979 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 CBWD2Q8IUF1 395 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 IL31RAQ8NI17 732 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 MAGEC3Q8TD91 643 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 TMC2Q8TDI7 906 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 PARD3BQ8TEW8 1205 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 MAIP1Q8WWC4 291 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 DDX1Q92499 740 aaKnown RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 NT5C1BQ96P26 610 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 NCAPGQ9BPX3 1015 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 HOMER3Q9NSC5 361 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 FBXO28Q9NVF7 368 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 PPIP5K2O43314 1243 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 ITIH2P19823 946 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 ADSSP30520 456 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 RDXP35241 583 aaKnown RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 CAP2P40123 477 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 GSCP56915 257 aaPredicted RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 ENPEPQ07075 957 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 MTMR1Q13613 665 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 ZYXQ15942 572 aaKnown RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 CNGA2Q16280 664 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 UBAP2Q5T6F2 1119 aaKnown RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 KRT27Q7Z3Y8 459 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 MAP4K3Q8IVH8 894 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 LRRC34Q8IZ02 419 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 FBXL13Q8NEE6 735 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 SUPT20HQ8NEM7 779 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 BTBD6Q96KE9 485 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 AGBL1Q96MI9 1066 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 SERPINB12Q96P63 405 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 PRMT1Q99873 361 aaKnown RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 JPH2Q9BR39 696 aaPredicted RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 ACP6Q9NPH0 428 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 HAUS2Q9NVX0 235 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 ZNF70Q9UC06 446 aaPredicted RBP14.25□□□□□ -0.13
SRP54-201ENST00000216774 TBX20Q9UMR3 447 aa14.25□□□□□ -0.13
SRP54-201ENST00000216774 ASTN2O75129 1339 aaPredicted RBP14.24□□□□□ -0.13
SRP54-201ENST00000216774 GRIN3BO60391 1043 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 ATP5DP30049 168 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 KCNJ1P48048 391 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CLEC16AQ2KHT3 1053 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 SGO2Q562F6 1265 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 ENOSF1Q7L5Y1 443 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 TMEM161BQ8NDZ6 487 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CLEC4DQ8WXI8 215 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CNKSR1Q969H4 720 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 ZKSCAN4Q969J2 545 aaPredicted RBP14.24□□□□□ -0.13
SRP54-201ENST00000216774 FAM81BQ96LP2 452 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 ANKEF1Q9NU02 776 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 MAP3K20Q9NYL2 800 aaKnown RBP14.24□□□□□ -0.13
SRP54-201ENST00000216774 SLC12A4Q9UP95 1085 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 GOLGA8IPA6NC78 632 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 GOLGA8JA6NMD2 632 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 YDJCA8MPS7 323 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 TP73O15350 636 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CLDN3O15551 220 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 SLCO1A2P46721 670 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 PSMC5P62195 406 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 CAV1Q03135 178 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 KRT17Q04695 432 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 SPP2Q13103 211 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 NBPF9Q3BBW0 867 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
SRP54-201ENST00000216774 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
SRP54-201ENST00000216774 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms