RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 BIRC3Q13489 604 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 LMBRD2Q68DH5 695 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 METTL7BQ6UX53 244 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 NOA1Q8NC60 698 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 ZNF483Q8TF39 744 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 RPGRIP1Q96KN7 1286 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 MROH8Q9H579 483 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 C17orf75Q9HAS0 396 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 XPNPEP1Q9NQW7 623 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 AIPL1Q9NZN9 384 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 CAPN6Q9Y6Q1 641 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 IGSF9BQ9UPX0 1349 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 EVI5O60447 810 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 CETPP11597 493 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 ELF1P32519 619 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 ICAM3P32942 547 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 GJA5P36382 358 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 PPP3CAQ08209 521 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 HSDL1Q3SXM5 330 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 ZNF571Q7Z3V5 609 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 SLC9A9Q8IVB4 645 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 LRRC71Q8N4P6 559 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 ARMC2Q8NEN0 867 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 ELMO3Q96BJ8 720 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 PACSIN1Q9BY11 444 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 GBA2Q9HCG7 927 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 APEX2Q9UBZ4 518 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 AJAP1Q9UKB5 411 aaPredicted RBP9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 DICER1Q9UPY3 1922 aaKnown RBP9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 SYNGAP1Q96PV0 1343 aa9.59□□□□□ -0.87
MTHFD1-201ENST00000216605 GSTTP1A0A1W2PQM5 241 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 GTPBP10A4D1E9 387 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 CNMDO75829 334 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TGFB3P10600 412 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 SOX5P35711 763 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ACOT2P49753 483 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TTLL4Q14679 1199 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 NFIL3Q16649 462 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TBC1D25Q3MII6 688 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 MAMSTRQ6ZN01 415 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 MAP4K3Q8IVH8 894 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 DRAXINQ8NBI3 349 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 MORC4Q8TE76 937 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 PPP1R16BQ96T49 567 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 STK33Q9BYT3 514 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 PDGFCQ9NRA1 345 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ZNF233A6NK53 670 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ZNF185O15231 689 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 NCK2O43639 380 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ARIH2O95376 493 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 FTCDO95954 541 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 NAT1P18440 290 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ATP4AP20648 1035 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 RDXP35241 583 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 PAFAH1B1P43034 410 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 RNASE9P60153 205 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 CKAP4Q07065 602 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 GRIK3Q13003 919 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 GRM1Q13255 1194 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 SLC5A9Q2M3M2 681 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 GJC2Q5T442 439 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 CCDC70Q6NSX1 233 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ZBTB33Q86T24 672 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TADA2BQ86TJ2 420 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 GLYCTKQ8IVS8 523 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 SPIRE2Q8WWL2 714 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TAF4BQ92750 862 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 NLRP4Q96MN2 994 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 SCLT1Q96NL6 688 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 STRA6Q9BX79 667 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TOPORSQ9NS56 1045 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 KIAA1217Q5T5P2 1943 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TARSL2A2RTX5 802 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ASB14A6NK59 587 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 EBAG9O00559 213 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 SNUPNO95149 360 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 SYF2O95926 243 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ADRB2P07550 413 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 H2AFZP0C0S5 128 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 KRT5P13647 590 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 KLRC1P26715 233 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 GTF2A2P52657 109 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 KCNV1Q6PIU1 500 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 H2AFVQ71UI9 128 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 IRF2BP2Q7Z5L9 587 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 GPD1LQ8N335 351 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ASAP3Q8TDY4 903 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 COG1Q8WTW3 980 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 FAM84AQ96KN4 292 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 TARS2Q9BW92 718 aaKnown RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 SIX2Q9NPC8 291 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 ADGRA3Q8IWK6 1321 aa9.58□□□□□ -0.88
MTHFD1-201ENST00000216605 BTBD19C9JJ37 291 aa9.57□□□□□ -0.88
MTHFD1-201ENST00000216605 FOXN3O00409 490 aaPredicted RBP9.57□□□□□ -0.88
MTHFD1-201ENST00000216605 PALMO75781 387 aa9.57□□□□□ -0.88
MTHFD1-201ENST00000216605 ADORA2AP29274 412 aa9.57□□□□□ -0.88
MTHFD1-201ENST00000216605 ADSSP30520 456 aa9.57□□□□□ -0.88
MTHFD1-201ENST00000216605 AMPD2Q01433 879 aa9.57□□□□□ -0.88
MTHFD1-201ENST00000216605 SEZ6Q53EL9 994 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms