RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 DAW1Q8N136 415 aa24.42■■□□□ 1.5
VTI1B-201ENST00000216456 PRSS33Q8NF86 280 aa24.42■■□□□ 1.5
VTI1B-201ENST00000216456 C2orf40Q9H1Z8 148 aa24.42■■□□□ 1.5
VTI1B-201ENST00000216456 ADAM28Q9UKQ2 775 aa24.42■■□□□ 1.5
VTI1B-201ENST00000216456 KIF4AO95239 1232 aa24.41■■□□□ 1.5
VTI1B-201ENST00000216456 ZRSR1Q15695 479 aaKnown RBP24.41■■□□□ 1.5
VTI1B-201ENST00000216456 NAB2Q15742 525 aa24.41■■□□□ 1.5
VTI1B-201ENST00000216456 GLRA4Q5JXX5 417 aa24.41■■□□□ 1.5
VTI1B-201ENST00000216456 TDRD5Q8NAT2 981 aaKnown RBP24.41■■□□□ 1.5
VTI1B-201ENST00000216456 RIN2Q8WYP3 895 aaPredicted RBP24.41■■□□□ 1.5
VTI1B-201ENST00000216456 PLIN2Q99541 437 aa24.41■■□□□ 1.5
VTI1B-201ENST00000216456 RXFP1Q9HBX9 757 aa24.41■■□□□ 1.5
VTI1B-201ENST00000216456 MYO10Q9HD67 2058 aa24.41■■□□□ 1.5
VTI1B-201ENST00000216456 C2orf16Q68DN1 1984 aa24.4■■□□□ 1.5
VTI1B-201ENST00000216456 GJB2P29033 226 aa24.4■■□□□ 1.5
VTI1B-201ENST00000216456 NHLH1Q02575 133 aa24.4■■□□□ 1.5
VTI1B-201ENST00000216456 PDIA5Q14554 519 aa24.4■■□□□ 1.5
VTI1B-201ENST00000216456 HSP90AA2PQ14568 343 aaPredicted RBP24.4■■□□□ 1.5
VTI1B-201ENST00000216456 RTP2Q5QGT7 225 aa24.4■■□□□ 1.5
VTI1B-201ENST00000216456 CEP120Q8N960 986 aa24.4■■□□□ 1.5
VTI1B-201ENST00000216456 PHOX2BQ99453 314 aa24.4■■□□□ 1.5
VTI1B-201ENST00000216456 ZDBF2Q9HCK1 2354 aa24.39■■□□□ 1.5
VTI1B-201ENST00000216456 SFI1A8K8P3 1242 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 N4BP1O75113 896 aaKnown RBP24.39■■□□□ 1.49
VTI1B-201ENST00000216456 HIP1RO75146 1068 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 NR1I2O75469 434 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 TADA2AO75478 443 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 ADH1AP07327 375 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 MUTP22033 750 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 PEX3P56589 373 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 RAD51AP2Q09MP3 1159 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 MAPK7Q13164 816 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 TUSC3Q13454 348 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 TAS1R3Q7RTX0 852 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 ALYREFQ86V81 257 aaKnown RBP24.39■■□□□ 1.49
VTI1B-201ENST00000216456 FBXL6Q8N531 539 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 IFT74Q96LB3 600 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 STK39Q9UEW8 545 aa24.39■■□□□ 1.49
VTI1B-201ENST00000216456 DENND4AQ7Z401 1863 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 CCDC195A0A1B0GUA6 201 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 CCDC169A6NNP5 214 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 TGM5O43548 720 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 ST18O60284 1047 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 GLUD1P00367 558 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 NPTX2P47972 431 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 PPP2R5AQ15172 486 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 ATF7IP2Q5U623 682 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 KIFAP3Q92845 792 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 PNMA5Q96PV4 448 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 SORCS3Q9UPU3 1222 aa24.38■■□□□ 1.49
VTI1B-201ENST00000216456 USP41Q3LFD5 358 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 KRT79Q5XKE5 535 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 RINT1Q6NUQ1 792 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 DTHD1Q6ZMT9 781 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 CCDC149Q6ZUS6 474 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 SUGP1Q8IWZ8 645 aaKnown RBP24.37■■□□□ 1.49
VTI1B-201ENST00000216456 ZDHHC14Q8IZN3 488 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 ST13P5Q8NFI4 369 aaPredicted RBP24.37■■□□□ 1.49
VTI1B-201ENST00000216456 ZNF707Q96C28 371 aaPredicted RBP24.37■■□□□ 1.49
VTI1B-201ENST00000216456 ADPGKQ9BRR6 497 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 GOLGA2P5Q9HBQ8 144 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 DNM3Q9UQ16 869 aa24.37■■□□□ 1.49
VTI1B-201ENST00000216456 ADAM12O43184 909 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 THP07101 528 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 OSTNP61366 133 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 MTMR3Q13615 1198 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 FAM171A1Q5VUB5 890 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 C1orf186Q6ZWK4 172 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 CEP57Q86XR8 500 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 SSX2IPQ9Y2D8 614 aa24.36■■□□□ 1.49
VTI1B-201ENST00000216456 KMT2EQ8IZD2 1858 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 ZMYM2Q9UBW7 1377 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 K7ERI5 159 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 PRPHP41219 470 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 ATP2C1P98194 919 aaPredicted RBP24.35■■□□□ 1.49
VTI1B-201ENST00000216456 LILRA6Q6PI73 481 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 TMEM130Q8N3G9 435 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 TARS2Q9BW92 718 aaKnown RBP24.35■■□□□ 1.49
VTI1B-201ENST00000216456 RAB34Q9BZG1 259 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 CDT1Q9H211 546 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 USTQ9Y2C2 406 aa24.35■■□□□ 1.49
VTI1B-201ENST00000216456 NPHP3-ACAD11A0A0J9YXS1 232 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 VWA3AA6NCI4 1184 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 EFNA5P52803 228 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 CACNB1Q02641 598 aaPredicted RBP24.34■■□□□ 1.49
VTI1B-201ENST00000216456 TCF15Q12870 199 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 CD300LGQ6UXG3 332 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 C15orf39Q6ZRI6 1047 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 LRRC15Q8TF66 581 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 RSAD2Q8WXG1 361 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 SMG7Q92540 1137 aaKnown RBP24.34■■□□□ 1.49
VTI1B-201ENST00000216456 ZBTB45Q96K62 511 aaPredicted RBP24.34■■□□□ 1.49
VTI1B-201ENST00000216456 ACO2Q99798 780 aaKnown RBP24.34■■□□□ 1.49
VTI1B-201ENST00000216456 CLSTN3Q9BQT9 956 aa24.34■■□□□ 1.49
VTI1B-201ENST00000216456 SF3B1O75533 1304 aaKnown RBP eCLIP24.34■■□□□ 1.49
VTI1B-201ENST00000216456 H3BQV1 296 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 I3L4J1 428 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 LAD1O00515 517 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 SLC16A4O15374 487 aa24.33■■□□□ 1.49
VTI1B-201ENST00000216456 MEFVO15553 781 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms